CNV Radar: an improved method for somatic copy number alteration characterization in oncology

被引:0
|
作者
David Soong
Jeran Stratford
Herve Avet-Loiseau
Nizar Bahlis
Faith Davies
Angela Dispenzieri
A. Kate Sasser
Jordan M. Schecter
Ming Qi
Chad Brown
Wendell Jones
Jonathan J. Keats
Daniel Auclair
Christopher Chiu
Jason Powers
Michael Schaffer
机构
[1] Janssen Research & Development,
[2] LLC,undefined
[3] Q2 Solutions,undefined
[4] EA Genomics,undefined
[5] Unite de Genomique du Myelome,undefined
[6] Institut Universitaire du Cancer de Toulouse-Oncopole,undefined
[7] University of Calgary,undefined
[8] Arnie Charbonneau Cancer Institute,undefined
[9] Myeloma Institute,undefined
[10] Mayo Clinic,undefined
[11] Division of Hematology,undefined
[12] Genmab,undefined
[13] Janssen Research & Development,undefined
[14] OmicSoft Corporation,undefined
[15] Translational Genomics Research Institute,undefined
[16] Multiple Myeloma Research Foundation,undefined
来源
关键词
Copy number variation; Next generation sequencing; Multiple myeloma; Acute myeloid leukemia; Prostate cancer;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [31] CNAPE: A Machine Learning Method for Copy Number Alteration Prediction from Gene Expression
    Mu, Quanhua
    Wang, Jiguang
    IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2021, 18 (01) : 306 - 311
  • [32] Somatic copy number variants detection using the NEBNext Direct target enrichment method
    Patel, Kruti M.
    Bowman, Sarah K.
    Henig, Noa
    Emerman, Amy B.
    Barry, Andrew
    Elfe, Charles
    Adams, Scott
    Russello, Salvatore
    Davis, Ted
    Hendrickson, Cynthia L.
    CANCER RESEARCH, 2017, 77
  • [33] CNV-seq, a new method to detect copy number variation using high-throughput sequencing
    Chao Xie
    Martti T Tammi
    BMC Bioinformatics, 10
  • [34] CNV-seq, a new method to detect copy number variation using high-throughput sequencing
    Xie, Chao
    Tammi, Martti T.
    BMC BIOINFORMATICS, 2009, 10
  • [35] Comprehensive characterization of copy number variation (CNV) called from array, long- and short-read data
    Ksenia Lavrichenko
    Stefan Johansson
    Inge Jonassen
    BMC Genomics, 22
  • [36] Comprehensive characterization of copy number variation (CNV) called from array, long- and short-read data
    Lavrichenko, Ksenia
    Johansson, Stefan
    Jonassen, Inge
    BMC GENOMICS, 2021, 22 (01)
  • [37] URINARY EXOSOMAL AND CELL-FREE DNA DETECTS SOMATIC MUTATION AND COPY NUMBER ALTERATION IN UROTHELIAL CARCINOMA OF BLADDER
    Kim, Kwang Hyun
    Sim, Bong Suk
    Lee, Dong Hyeon
    JOURNAL OF UROLOGY, 2018, 199 (04): : E718 - E718
  • [38] Somatic Copy Number Alteration-Based Prediction of Molecular Subtypes of Breast Cancer Using Deep Learning Model
    Islam, Md. Mohaiminul
    Ajwad, Rasif
    Chi, Chen
    Domaratzki, Michael
    Wang, Yang
    Hu, Pingzhao
    ADVANCES IN ARTIFICIAL INTELLIGENCE, CANADIAN AI 2017, 2017, 10233 : 57 - 63
  • [39] Development of combined somatic copy number alteration and fragmentation analysis for monitoring in colorectal cancer patients using liquid biopsy
    Hallermayr, Ariane
    Steinke-Lange, Verena
    Benetpages, Anna
    Wohlfrom, Tobias
    Scharf, Florentine
    Heitzer, Ellen
    Haberl, Christopher
    de Wit, Maike
    Vogelsang, Holger
    Rentsch, Markus
    Holinski-Feder, Elke
    Romic-Pickl, Julia
    EUROPEAN JOURNAL OF HUMAN GENETICS, 2023, 31 : 558 - 559
  • [40] Urinary Exosomal and cell-free DNA Detects Somatic Mutation and Copy Number Alteration in Urothelial Carcinoma of Bladder
    Dong Hyeon Lee
    Hana Yoon
    Sanghui Park
    Jeong Seon Kim
    Young-Ho Ahn
    Kihwan Kwon
    Donghwan Lee
    Kwang Hyun Kim
    Scientific Reports, 8