A reverse-transcription loop-mediated isothermal amplification (RT-LAMP) assay for detecting the pathogen of maize rough dwarf disease in China

被引:0
作者
Linlin Du
Wenjuan Shi
Xuejuan Li
Ying Lan
Feng Sun
Yongjian Fan
Tong Zhou
Yijun Zhou
机构
[1] Nanjing Agricultural University,College of Plant Protection
[2] Jiangsu Academy of Agricultural Sciences,Jiangsu Key Laboratory for Food Quality and Safety
[3] Jiangsu University,State Key Laboratory Cultivation Base, Institute of Plant Protection
[4] Jiangsu University,School of the Environment and Safety Engineering
[5] International Rice Research Institute and Jiangsu Academy of Agricultural Sciences Joint Laboratory,Institute of Life Sciences
来源
Australasian Plant Pathology | 2019年 / 48卷
关键词
MRDD; Rapid detection; RT-LAMP; Calcein; Diagnosis;
D O I
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中图分类号
学科分类号
摘要
Maize rough dwarf disease (MRDD) is one of the most serious viral diseases of maize in China. The object of this study is to develop a reverse-transcription loop-mediated isothermal amplification (RT-LAMP) assay for rapid and sensitive detection of MRDD pathogen. Four RT-LAMP primers were designed on the basis of S10. Template RNA from infected leaves were used for RT-LAMP which were carried out under isothermal conditions at 61 °C for 90 min. RT-LAMP products were analyzed by electrophoresis in agarose gels or visual inspection of color change after staining with calcein. Sensitivity of the RT-LAMP assay was 100-fold higher than RT-PCR. This method can distinguish RBSDV from SRBSDV and the vectors carrying RBSDV from Rice stripe virus (RSV). The RT-LAMP assay shows excellent potential for application in the rapid and sensitive detection of MRDD pathogens in field samples or vector.
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页码:485 / 489
页数:4
相关论文
共 156 条
[1]  
Bai FW(2002)Phylogenetic analysis reveals that a dwarfing disease on different cereal crops in China is due to rice black streaked dwarf virus (RBSDV) Virus Genes 25 201-206
[2]  
Yan J(2015)Loop-mediated isothermal amplification assay for sensitive and rapid detection of Phytophthora capsici Can J Plant Pathol 37 485-494
[3]  
Qu ZC(2004)First report of maize rough dwarf virus (MRDV) on maize crops in Greece Plant Pathol 53 238-5
[4]  
Zhang HW(2015)Development and evaluation of a RT-LAMP assay for rapid detection of hepatitis E virus from shellfish Int J Food Microbiol 220 1-94
[5]  
Xu J(2016)Rapid, sensitive detection of Bartonella quintana by loop-mediated isothermal amplification of the Int J Mol Sci 17 1902-217
[6]  
Ye MM(2011) Gen Chin J Rice Sci 25 91-29
[7]  
Shen DL(2017)A simplified method for quickly detection of rice black-streaked dwarf virus and southern rice black-streaked dwarf virus Can J Plant Pathol 39 212-510
[8]  
Dong ZM(2015)A single-step reverse transcription loop-mediated isothermal amplification assay for rapid and accurate detection of pepper vein yellows virus J Virol Methods 212 23-154
[9]  
Liu PQ(1998)Development of a reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay for the detection of sugarcane mosaic virus, and Sorghum mosaic virus in sugarcane Plant Dis 82 448-7
[10]  
Li BJ(2016)Recent outbreak of “ Can J Plant Pathol 38 506-187