Electronic parameters for charge transfer along DNA

被引:0
作者
L. G. D. Hawke
G. Kalosakas
C. Simserides
机构
[1] University of Patras,Materials Science Department
[2] Institute of Materials Science,National Center of Scientific Research Demokritos
来源
The European Physical Journal E | 2010年 / 32卷
关键词
Wave Function; Thymine; LUMO Energy; Homo Energy; Matrix Element Versus;
D O I
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中图分类号
学科分类号
摘要
We systematically examine all the tight-binding parameters pertinent to charge transfer along DNA. The \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$ \pi$\end{document} molecular structure of the four DNA bases (adenine, thymine, cytosine, and guanine) is investigated by using the linear combination of atomic orbitals method with a recently introduced parametrization. The HOMO and LUMO wave functions and energies of DNA bases are discussed and then used for calculating the corresponding wave functions of the two B-DNA base-pairs (adenine-thymine and guanine-cytosine). The obtained HOMO and LUMO energies of the bases are in good agreement with available experimental values. Our results are then used for estimating the complete set of charge transfer parameters between neighboring bases and also between successive base-pairs, considering all possible combinations between them, for both electrons and holes. The calculated microscopic quantities can be used in mesoscopic theoretical models of electron or hole transfer along the DNA double helix, as they provide the necessary parameters for a tight-binding phenomenological description based on the \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$ \pi$\end{document} molecular overlap. We find that usually the hopping parameters for holes are higher in magnitude compared to the ones for electrons. Our findings are also compared with existing calculations from first principles.
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  • [1] Keren K.(2002)undefined Science 297 72-undefined
  • [2] Krueger M.(2003)undefined Nature 421 427-undefined
  • [3] Gilad R.(2004)undefined Rev. Mod. Phys. 76 195-undefined
  • [4] Ben-Yoseph G.(1998)undefined Chem. Rev. 98 1109-undefined
  • [5] Sivan U.(1997)undefined Science 275 1465-undefined
  • [6] Braun E.(2000)undefined Mutation Res. 447 49-undefined
  • [7] Seeman N.C.(2002)undefined Phys. Rev. Lett. 89 198102-undefined
  • [8] Endres R.G.(2001)undefined Appl. Phys. Lett. 79 3881-undefined
  • [9] Cox D.L.(2000)undefined Phys. Rev. Lett. 85 4992-undefined
  • [10] Singh R.R.P.(2001)undefined Phys. Rev. Lett. 87 198102-undefined