Development of SSR markers for typing cultivars in the mushroom Auricularia auricula-judae

被引：0
|
作者：
Rui Ying Zhang
Dan Dan Hu
Jin Gang Gu
Qing Xiu Hu
Xue Mei Zuo
He Xiang Wang
机构：
[1] Chinese Academy of Agricultural Sciences,Key Laboratory of Microbial Resources Collection and Preservation, Ministry of Agriculture, and Institute of Agricultural Resources and Regional Planning
[2] Beijing Academy of Science and Technology,State Key Laboratory for Agrobiotechnology and Department of Microbiology
[3] China Agricultural University,undefined
来源：
Mycological Progress | 2012年 / 11卷
关键词：
Mushroom; Simple sequence repeat (SSR); Polymorphism;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
Auricularia auricula-judae, also known as black wood ear, is one of the most popular edible mushrooms in China. But the confusion about cultivars has limited the development of A. auricula-judae production. In this article, 17 polymorphic SSR markers were cloned and used to differentiate the cultivars of A. auricula-judae. The polymorphism information content (PIC) of these SSR ranged from 0.10 to 0.84, while the average was 0.47. The number of alleles detected for each locus was 2–11, with an average of 4.7 alleles per locus. The dendrogram, based on 17 SSR markers by UPGMA clustering, could differentiate the 16 A. auricula-judae cultivars in this study. In fact, the 16 cultivars analyzed in this study could be efficiently differentiated using a combination of three polymorphic SSR loci with high PIC. The total of 17 polymorphic SSR loci could also be amplified correctly in the A. polytricha strains surveyed. This is the first report on the development of SSR markers in the genus Auricularia.
引用
收藏
页码：587 / 592
页数：5
相关论文
共 50 条
  • [1] Development of SSR markers for typing cultivars in the mushroom Auricularia auricula-judae
    Zhang, Rui Ying
    Hu, Dan Dan
    Gu, Jin Gang
    Hu, Qing Xiu
    Zuo, Xue Mei
    Wang, He Xiang
    MYCOLOGICAL PROGRESS, 2012, 11 (02) : 587 - 592
  • [2] Development of a Molecular Marker for Fruiting Body Pattern in Auricularia auricula-judae
    Yao, Fang-Jie
    Lu, Li-Xin
    Wang, Peng
    Fang, Ming
    Zhang, You-Min
    Chen, Ying
    Zhang, Wei-Tong
    Kong, Xiang-Hui
    Lu, Jia
    Honda, Yoichi
    MYCOBIOLOGY, 2018, 46 (01) : 72 - 78
  • [3] Effect of Medicinal Mushroom, Auricularia auricula-judae, polysaccharides against EAC cell lines
    Gurusamy, Ramasamy
    Arthe, Rajarajan
    RESEARCH JOURNAL OF BIOTECHNOLOGY, 2012, 7 (02): : 14 - 17
  • [4] Evaluation of the phytoconstituents of Auricularia auricula-judae mushroom and antimicrobial activity of its protein extract
    Oli, Angus Nnamdi
    Edeh, Peter Anyigor
    Al-Mosawi, Reham M.
    Mbachu, Nancy Amara
    Al-Dahmoshi, Hussein O. M.
    Al-Khafaji, Noor S. K.
    Ekuma, Uchechukwu Onyeukwu
    Okezie, Ugochukwu Moses
    Saki, Morteza
    EUROPEAN JOURNAL OF INTEGRATIVE MEDICINE, 2020, 38
  • [5] Gelation mechanism of polysaccharides from Auricularia auricula-judae
    Bao, Honghui
    Zhou, Rui
    You, SangGuan
    Wu, Shengfang
    Wang, Qi
    Cui, Steve W.
    FOOD HYDROCOLLOIDS, 2018, 76 : 35 - 41
  • [6] Hypoglycemic Effect of the Degraded Polysaccharides from the Wood Ear Medicinal Mushroom Auricularia auricula-judae (Agaricomycetes)
    Shen, Meng
    Fang, Zhiyu
    Chen, Yutao
    Chen, Yidan
    Xiao, Bin
    Guo, Li
    Xu, Yaoyao
    Wang, Ge
    Wang, Weimin
    Zhang, Yongjun
    INTERNATIONAL JOURNAL OF MEDICINAL MUSHROOMS, 2019, 21 (10) : 1033 - 1042
  • [7] Global diversity and taxonomy of the Auricularia auricula-judae complex (Auriculariales, Basidiomycota)
    Fang Wu
    Yuan Yuan
    Shuang-Hui He
    Asanka R. Bandara
    Kevin D. Hyde
    Vera F. Malysheva
    De-Wei Li
    Yu-Cheng Dai
    Mycological Progress, 2015, 14
  • [8] Preparation of Wood Ear Mushroom, Auricularia auricula-judae (Agaricomycetes), Polysaccharides by Neutral Protease and Their Antioxidant Stress Capacity
    Xiao, Bin
    Chen, Shuang
    Huang, Qiqi
    Zeng, Jiangying
    Zhang, Yongjun
    INTERNATIONAL JOURNAL OF MEDICINAL MUSHROOMS, 2021, 23 (05) : 41 - 53
  • [9] Structure and chain conformation of ß-glucan isolated from Auricularia auricula-judae
    Ma, Zhaocheng
    Wang, Jianguo
    Zhang, Lina
    BIOPOLYMERS, 2008, 89 (07) : 614 - 622
  • [10] CAPACITY OF AURICULARIA AURICULA-JUDAE TO DEGRADE AGRO-FORESTRY RESIDUES
    Galic, Milica
    Stajic, Mirjana
    Vukojevic, Jelena
    Cilerdzic, Jasmina
    CELLULOSE CHEMISTRY AND TECHNOLOGY, 2020, 54 (1-2): : 179 - 184
12345