A DFT study on the adsorption of DNA nucleobases on the C3N nanotubes as a sequencer

被引:0
|
作者
Jie Zhao
Wenli Li
Saeed Amir Aslanzadeh
机构
[1] College of Chemical Engineering,Department of Science, Faculty of Enghelab Islami
[2] Chongqing Chemical Industry Vocational College,undefined
[3] College of Environmental Quality Testing,undefined
[4] Chongqing Chemical Industry Vocational College,undefined
[5] Tehran Branch,undefined
[6] Technical and Vocational University (TVU),undefined
来源
Journal of Molecular Modeling | 2021年 / 27卷
关键词
DNA nucleobase; Density functional; Adsorption; Sensor;
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学科分类号
摘要
Deoxyribonucleic acid (DNA) sequencing is a crucial issue for the cure of different kinds of diseases. Here, we computationally explored the effect of DNA nucleobases on the electronic properties and electrical conductivity of a zigzag (10,0) C3N nanotube (C3NNT) at B3LYP-gCP-D3 level of theory. Our calculations revealed that the binding energy of nucleobases shows the order of guanine (G) > cytosine (C) > thymine (T) > adenine (A). Based on the energy decomposition analysis (EDA), the G, C, and T strongly interact with the C3NNT, but the A nucleobase adsorbed mainly via electrostatic attraction and dispersion forces. We exposed that the nucleobase size and its carbonyl group determine its adsorption behavior. The DNA nucleobase adsorption meaningfully increased the electrical conductivity of C3NNT. The C3NNT sensing response toward G, C, T, or A was predicted to be 131, 66, 60, or 10. Therefore, the C3NNT might be applied to selectively detect the G, C, T, and A. Our findings expose the usefulness of C3NNT as a next-generation DNA sequencer, suggesting new leads for future progresses in sustainable designs, superior sensing architectures, and bioelectronics.
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