Bacteria alone establish the chemical basis of the wood-fall chemosynthetic ecosystem in the deep-sea

被引:0
作者
Dimitri Kalenitchenko
Nadine Le Bris
Laetitia Dadaglio
Erwan Peru
Arnaud Besserer
Pierre E Galand
机构
[1] Sorbonne Universités,
[2] UPMC Univ Paris 06,undefined
[3] CNRS,undefined
[4] Laboratoire d’Ecogéochimie des Environnements Benthiques (LECOB),undefined
[5] Observatoire Océanologique,undefined
[6] Université de Lorraine,undefined
[7] Laboratoire d’étude du matériau bois (LERMAB),undefined
[8] Campus bois,undefined
来源
The ISME Journal | 2018年 / 12卷
关键词
D O I
暂无
中图分类号
学科分类号
摘要
Wood-fall ecosystems host chemosynthetic bacteria that use hydrogen sulfide as an electron donor. The production of hydrogen sulfide from decaying wood in the deep-sea has long been suspected to rely on the activity of wood-boring bivalves, Xylophaga spp. However, recent mesocosm experiments have shown hydrogen sulfide production in the absence of wood borers. Here, we combined in situ chemical measurements, amplicon sequencing and metagenomics to test whether the presence of Xylophaga spp.-affected hydrogen sulfide production and wood microbial community assemblages. During a short-term experiment conducted in a deep-sea canyon, we found that wood-fall microbial communities could produce hydrogen sulfide in the absence of Xylophaga spp. The presence of wood borers had a strong impact on the microbial community composition on the wood surface but not in the wood centre, where communities were observed to be homogeneous among different samples. When wood borers were excluded, the wood centre community did not have the genetic potential to degrade cellulose or hemicellulose but could use shorter carbohydrates such as sucrose. We conclude that wood centre communities produce fermentation products that can be used by the sulfate-reducing bacteria detected near the wood surface. We thus demonstrate that microorganisms alone could establish the chemical basis essential for the recruitment of chemolithotrophic organisms in deep-sea wood falls.
引用
收藏
页码:367 / 379
页数:12
相关论文
共 283 条
  • [1] Bernardino AF(2010)Macrofaunal succession in sediments around kelp and wood falls in the deep NE Pacific and community overlap with other reducing habitats Deep-Sea Res Part I 57 708-723
  • [2] Smith CR(2014)Diversity of bacterial communities on sunken woods in the Mediterranean Sea J Mar Sci Technol 22 60-66
  • [3] Baco A(1996)The cellulosome: an exocellular, multiprotein complex specialized in cellulose degradation Crit Rev Biochem Mol Biol 31 201-236
  • [4] Altamira I(2013)How deep-sea wood falls sustain chemosynthetic life Plos ONE 8 e53590-5
  • [5] Sumida PYG(2012)Microbial degradation of waterlogged archaeological wood J Cult Herit 13 1-2120
  • [6] Bessette S(2014)Trimmomatic: a flexible trimmer for Illumina sequence data Bioinformatics 30 2114-274
  • [7] Fagervold SK(2000)Monosaccharide transporters in plants: structure, function and physiology Biochem Biophys Acta 1465 263-1697
  • [8] Romano C(2009)BLAST+: architecture and applications BMC Bioinformatics 10 421-161
  • [9] Martin D(2000)Natural assemblages of marine proteobacteria and members of the Cytophaga-Flavobacter cluster consuming low- and high-molecular-weight dissolved organic matter Appl Environ Microb 66 1692-81
  • [10] Le Bris N(2010)SolexaQA: at-a-glance quality assessment of Illumina second-generation sequencing data BMC Bioinformatics 11 485-667