Development and characterization of microsatellite loci in Ixeridium dentatum (Asteraceae, Lactuceae)

被引:0
|
作者
Sayaka Nakagawa
Motomi Ito
机构
[1] The University of Tokyo,Graduate School of Arts and Sciences
来源
Journal of Plant Research | 2009年 / 122卷
关键词
Asteraceae; Lactuceae; Microsatellite; Population genetics;
D O I
暂无
中图分类号
学科分类号
摘要
We isolated and characterized seven microsatellite loci for the perennial herb Ixeridium dentatum ssp. dentatum, an apomictic triploid distributed throughout the lowland areas of East Asia. The number of alleles ranged from two to seven in 32 screened individuals of I. dentatum ssp. dentatum from Japan. The observed and expected heterozygosities were 0.000–0.950 and 0.000–0.891, respectively, calculated using genotypes of 20 individuals of I. dentatum ssp. nipponicum. One locus (msid4) deviated significantly from Hardy–Weinberg equilibrium (P = 0.0001). These microsatellites were also tested for cross-amplification in 11 other taxa of Lactuceae, including five endangered taxa. These primers should be useful genetic tools not only for Ixeridium but also for other Lactuceae taxa.
引用
收藏
页码:581 / 584
页数:3
相关论文
共 50 条
  • [41] Characterization of microsatellite loci in the Kaka, Nestor meridionalis
    Sainsbury, JP
    Macavoy, ES
    Chambers, GK
    MOLECULAR ECOLOGY NOTES, 2004, 4 (04): : 623 - 625
  • [42] Development and characterization of 16 polymorphic microsatellite loci in the Tibet endemic fish Glyptosternum maculatum
    Guo, B. Y.
    Xie, C. X.
    Shan, L.
    Zhang, Y.
    Wang, H. L.
    Xiong, D. M.
    Liu, H. P.
    Ji, Q.
    MOLECULAR ECOLOGY RESOURCES, 2009, 9 (01) : 380 - 382
  • [43] Isolation and Characterization of 11 New Microsatellite Loci in Erigeron breviscapus (Asteraceae), an Important Chinese Traditional Herb
    Li, Xiang
    Song, Kexian
    Yang, Junbo
    Yi, Tingshuang
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2011, 12 (10): : 7265 - 7270
  • [44] DEVELOPMENT OF MICROSATELLITE LOCI FOR PINUS KORAIENSIS (PINACEAE)
    Li, Yong
    Liang, Lu
    Ge, Xue-Jun
    AMERICAN JOURNAL OF BOTANY, 2010, 97 (06) : E39 - E41
  • [45] DEVELOPMENT AND CHARACTERIZATION OF MICROSATELLITE LOCI FOR SMOOTH CORDGRASS, SPARTINA ALTERNIFLORA (POACEAE)
    Guo, Wuxia
    Huang, Yelin
    He, Ziwen
    Yan, Yubin
    Zhou, Renchao
    Shi, Suhua
    APPLICATIONS IN PLANT SCIENCES, 2013, 1 (01):
  • [46] Development and characterization of 12 microsatellite loci for the Dwarf Salamander, Eurycea quadridigitata
    Anna M. Mckee
    Stacey L. Lance
    Kenneth L. Jones
    Cris Hagen
    Travis C. Glenn
    Conservation Genetics Resources, 2011, 3 : 633 - 635
  • [47] Development and characterization of tetranucleotide microsatellite loci for the American alligator (Alligator mississippiensis)
    Subalusky, Amanda L.
    Garrick, Ryan C.
    Schable, Nancy A.
    Osborne, Jessica
    Glenn, Travis C.
    CONSERVATION GENETICS RESOURCES, 2012, 4 (03) : 567 - 570
  • [48] Development and characterization of microsatellite loci for Rhinogobius sp. YB (Gobiidae)
    Noriyuki Koizumi
    Takumi Moriyama
    Tetsuo Yoshino
    Kazuya Nishida
    Atsushi Mori
    Keiji Watabe
    Takeshi Takemura
    Conservation Genetics Resources, 2015, 7 : 137 - 141
  • [49] Development and characterization of 17 microsatellite loci in an anadromous fish Coilia nasus
    Qiaoli Yang
    Tianxiang Gao
    Jin-Xian Liu
    Conservation Genetics Resources, 2014, 6 : 357 - 359
  • [50] Development and characterization of 12 microsatellite loci for the Dwarf Salamander, Eurycea quadridigitata
    Mckee, Anna M.
    Lance, Stacey L.
    Jones, Kenneth L.
    Hagen, Cris
    Glenn, Travis C.
    CONSERVATION GENETICS RESOURCES, 2011, 3 (04) : 633 - 635