A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers

被引:0
|
作者
Michael A Quail
Miriam Smith
Paul Coupland
Thomas D Otto
Simon R Harris
Thomas R Connor
Anna Bertoni
Harold P Swerdlow
Yong Gu
机构
[1] Wellcome Trust Sanger Institute,
来源
BMC Genomics | / 13卷
关键词
Next-generation sequencing; Ion torrent; Illumina; Pacific biosciences; MiSeq; PGM; SMRT; Bias; Genome coverage; GC-rich; AT-rich;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 46 条
  • [21] Development of Class I HLA Gene In-House HLA-Typing Methods (HLA A, HLA B, and HLA C) using Next Generation Sequencing Illumina MiSeq
    Yuliwulandari, Rika
    Prayuni, Kinasih
    Kenconoviyati
    Susilowati, R. W.
    Sofro, Abdul Salam M.
    MAJALAH KEDOKTERAN BANDUNG-MKB-BANDUNG MEDICAL JOURNAL, 2015, 47 (03): : 152 - 159
  • [22] A Comparison of Bioinformatics Pipelines for Enrichment Illumina Next Generation Sequencing Systems in Detecting SARS-CoV-2 Virus Strains
    Afiahayati
    Bernard, Stefanus
    Gunadi
    Wibawa, Hendra
    Hakim, Mohamad Saifudin
    Marcellus
    Parikesit, Arli Aditya
    Dewa, Chandra Kusuma
    Sakakibara, Yasubumi
    GENES, 2022, 13 (08)
  • [23] Genotyping of high-risk anal human papillomavirus (HPV): ion torrent-next generation sequencing vs. linear array
    Nowak, Rebecca G.
    Ambulos, Nicholas P.
    Schumaker, Lisa M.
    Mathias, Trevor J.
    White, Ruth A.
    Troyer, Jennifer
    Wells, David
    Charurat, Manhattan E.
    Bentzen, Soren M.
    Cullen, Kevin J.
    VIROLOGY JOURNAL, 2017, 14
  • [24] Ion Torrent next-generation sequencing reveals the complete mitochondrial genome of koi carp (Cyprinus carpio, Cyprinidae)
    Li, Xuezhu
    Zeng, Jie
    Zhang, Hetong
    Weng, Shaoping
    He, Jianguo
    Dong, Chuanfu
    MITOCHONDRIAL DNA PART B-RESOURCES, 2016, 1 (01): : 34 - 36
  • [25] Genotyping of high-risk anal human papillomavirus (HPV): ion torrent-next generation sequencing vs. linear array
    Rebecca G. Nowak
    Nicholas P. Ambulos
    Lisa M. Schumaker
    Trevor J. Mathias
    Ruth A. White
    Jennifer Troyer
    David Wells
    Manhattan E. Charurat
    Søren M. Bentzen
    Kevin J. Cullen
    Virology Journal, 14
  • [26] Successful preimplantation genetic diagnosis by targeted next-generation sequencing on an ion torrent personal genome machine platform
    Hao, Yan
    Chen, Dawei
    Zhang, Zhiguo
    Zhou, Ping
    Cao, Yunxia
    Wei, Zhaolian
    Xu, Xiaofeng
    Chen, Beili
    Zou, Weiwei
    Lv, Mingrong
    Ji, Dongmei
    He, Xiaojin
    ONCOLOGY LETTERS, 2018, 15 (04) : 4296 - 4302
  • [27] Next generation sequencing with a semi-conductor technology (Ion Torrent PGM™) for HLA typing: overall workflow performance and debate
    Moalic-Allain, Virginie
    Mercier, Bernard
    Gueguen, Paul
    Ferec, Claude
    ANNALES DE BIOLOGIE CLINIQUE, 2016, 74 (04) : 449 - 456
  • [28] Ion torrent next-generation sequencing reveals the complete mitochondrial genome of endangered mahseer Tor khudree (Sykes, 1839)
    Raman, Sudhanshu
    Pavan-Kumar, A.
    Koringa, Prakash G.
    Patel, Namrata
    Shah, Tejas
    Singh, Rajeev K.
    Krishna, Gopal
    Joshi, C. G.
    Gireesh-Babu, P.
    Chaudhari, Aparna
    Lakra, W. S.
    MITOCHONDRIAL DNA PART A, 2016, 27 (04) : 2949 - 2950
  • [29] Percutaneous Lung Biopsy for Genomic Assessment: Comparison between Two Different next Generation Sequencing Platforms
    Lima, Livia Maria Frota
    Sabir, Sharjeel
    JOURNAL OF THORACIC ONCOLOGY, 2017, 12 (01) : S544 - S544
  • [30] Fast and Robust Next-Generation Sequencing Technique Using Ion Torrent Personal Genome Machine for the Screening of Neurofibromatosis Type 1 (NF1) Gene
    Bernadett Balla
    Kristóf Árvai
    Péter Horváth
    Bálint Tobiás
    István Takács
    Zsolt Nagy
    Magdolna Dank
    György Fekete
    János P. Kósa
    Péter Lakatos
    Journal of Molecular Neuroscience, 2014, 53 : 204 - 210