Optimized co-solute paramagnetic relaxation enhancement for the rapid NMR analysis of a highly fibrillogenic peptide

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作者
Nur Alia Oktaviani
Michael W. Risør
Young-Ho Lee
Rik P. Megens
Djurre H. de Jong
Renee Otten
Ruud M. Scheek
Jan J. Enghild
Niels Chr. Nielsen
Takahisa Ikegami
Frans A. A. Mulder
机构
[1] University of Groningen,Groningen Biomolecular Sciences and Biotechnology Institute
[2] University of Aarhus,Interdisciplinary Nanoscience Center (iNANO) and Department of Chemistry
[3] Osaka University,Institute for Protein Research
[4] University of Groningen,Stratingh Institute for Chemistry
[5] University of Aarhus,Interdisciplinary Nanoscience Center (iNANO) and Department of Molecular Biology and Genetics
[6] Yokohama City University,Graduate School of Medical Life Science
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关键词
Paramagnetic relaxation enhancement; Intrinsically disordered proteins; Fe(DO3A); α; -Antitrypsin; Amyloid beta-peptides; NMR spectroscopy;
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摘要
Co-solute paramagnetic relaxation enhancement (PRE) is an attractive way to speed up data acquisition in NMR spectroscopy by shortening the T1 relaxation time of the nucleus of interest and thus the necessary recycle delay. Here, we present the rationale to utilize high-spin iron(III) as the optimal transition metal for this purpose and characterize the properties of its neutral chelate form Fe(DO3A) as a suitable PRE agent. Fe(DO3A) effectively reduces the T1 values across the entire sequence of the intrinsically disordered protein α-synuclein with negligible impact on line width. The agent is better suited than currently used alternatives, shows no specific interaction with the polypeptide chain and, due to its high relaxivity, is effective at low concentrations and in ‘proton-less’ NMR experiments. By using Fe(DO3A) we were able to complete the backbone resonance assignment of a highly fibrillogenic peptide from α1-antitrypsin by acquiring the necessary suite of multidimensional NMR datasets in 3 h.
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页码:129 / 142
页数:13
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