Given the current interest in measurement uncertainty (MU) in food microbiology, in particular for laboratory accreditation purposes, and the need to have harmonized reference documents specifically in that area at the international level, ISO is conducting works to meet this need. An ISO Technical Specification (ISO/TS 19036) is being prepared on MU estimation for quantitative determinations. A global approach has been chosen, based on the reproducibility standard deviation of the final result of the measurement process. Three possibilities are envisaged for the estimation of the reproducibility standard deviation, in a decreasing order of preference: The intra-laboratory standard deviation, the inter-laboratory standard deviation derived from method validation, and the inter-laboratory standard deviation derived from proficiency testing.The uncertainty of qualitative determinations is still under investigation, and will be covered by a separate ISO publication.