Evaluation of the Bruker Matrix-Assisted Laser Desorption–Ionization Time-of-Flight Mass Spectrometry (MALDI-TOF MS) System for the Identification of Clinically Important Dermatophyte Species
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作者:
Nilgün Karabıçak
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机构:Public Health Institute of Turkey,National Mycology Reference Laboratory
Nilgün Karabıçak
Onur Karatuna
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机构:Public Health Institute of Turkey,National Mycology Reference Laboratory
Onur Karatuna
Macit İlkit
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机构:Public Health Institute of Turkey,National Mycology Reference Laboratory
Macit İlkit
Işın Akyar
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机构:Public Health Institute of Turkey,National Mycology Reference Laboratory
Işın Akyar
机构:
[1] Public Health Institute of Turkey,National Mycology Reference Laboratory
[2] Acıbadem University,Department of Medical Microbiology, School of Medicine
[3] Çukurova University,Division of Mycology, Department of Microbiology, School of Medicine
Dermatophytes can invade the stratum corneum of the skin and other keratinized tissues and are responsible for a broad diversity of diseases of skin, nails and hair. Although the standard identification of dermatophytoses depends on macroscopic and microscopic characterization of the colonies grown on special media, there are a number of limitations owing to intraspecies morphological variability, atypical morphology or interspecies morphological similarity which entails improvement in the identification methods. Matrix-assisted laser desorption–ionization time-of-flight mass spectrometry (MALDI-TOF MS) is a novel method which proved to be effective for rapid and reliable identification of dermatophytes grown in cultures when compared to conventional methods. We evaluated the performance of Bruker MALDI-TOF MS System (Bruker Daltonics, Germany) for identification of clinically relevant dermatophytes. In order to increase the identification capacity of the system, we created supplemental spectral database entries using ten reference dermatophyte strains (ten species in two genera). The utility of the generated database was then challenged using a total of 126 dermatophytes (115 clinical isolates and 11 additional reference strains). The results were evaluated by both manufacturer-recommended and lowered cutoff scores. MALDI-TOF MS provided correct identification in 122 (96.8 %) and 113 (89.7 %) of the isolates with the lowered scores and using the supplemented database, respectively, versus 65 (51.6 %) and 17 (13.5 %) correct identifications obtained by the unmodified database and recommended scores at the genus and species levels, respectively. Our results support the potential utility of MALDI-TOF MS as a routine tool for accurate and reliable identification of dermatophytes.
机构:
Univ Hosp Virgen Rocio, Infect Dis Clin Microbiol & Prevent Med Unit, Av Manuel Siurot S-N, Seville 41013, SpainUniv Hosp Virgen Rocio, Infect Dis Clin Microbiol & Prevent Med Unit, Av Manuel Siurot S-N, Seville 41013, Spain
Reyes Vidal-Acuna, M.
Ruiz-Perez de Pipaon, Maite
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Univ Hosp Virgen Rocio, Infect Dis Clin Microbiol & Prevent Med Unit, Av Manuel Siurot S-N, Seville 41013, Spain
Univ Seville, CSIC, Univ Hosp Virgen Rocio, Inst Biomed Sevilla IBIS, Seville, SpainUniv Hosp Virgen Rocio, Infect Dis Clin Microbiol & Prevent Med Unit, Av Manuel Siurot S-N, Seville 41013, Spain
机构:
Univ Sao Paulo, Inst Biomed Sci, Dept Parasitol, GlycoProte Lab, Av Prof Lineu Prestes 1374, BR-05508900 Sao Paulo, SP, BrazilUniv Sao Paulo, Inst Biomed Sci, Dept Parasitol, GlycoProte Lab, Av Prof Lineu Prestes 1374, BR-05508900 Sao Paulo, SP, Brazil
Avila, C. C.
Almeida, F. G.
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Univ Sao Paulo, Inst Biomed Sci, BR-05508 Sao Paulo, BrazilUniv Sao Paulo, Inst Biomed Sci, Dept Parasitol, GlycoProte Lab, Av Prof Lineu Prestes 1374, BR-05508900 Sao Paulo, SP, Brazil
Almeida, F. G.
Palmisano, G.
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Univ Sao Paulo, Inst Biomed Sci, Dept Parasitol, GlycoProte Lab, Av Prof Lineu Prestes 1374, BR-05508900 Sao Paulo, SP, BrazilUniv Sao Paulo, Inst Biomed Sci, Dept Parasitol, GlycoProte Lab, Av Prof Lineu Prestes 1374, BR-05508900 Sao Paulo, SP, Brazil
Palmisano, G.
JOURNAL OF MASS SPECTROMETRY,
2016,
51
(08):
: 549
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557