Identification of new mutations in patients with hereditary spherocytosis by next-generation sequencing

被引:0
作者
Li Qin
Yanbo Nie
Hong Zhang
Long Chen
Donglei Zhang
Yani Lin
Kun Ru
机构
[1] Chinese Academy of Medical Sciences,Department of Pathology and Lab Medicine, Institute of Hematology and Blood Diseases Hospital
[2] Tianjin Sino-US Diagnostics Co.,undefined
[3] Ltd.,undefined
来源
Journal of Human Genetics | 2020年 / 65卷
关键词
D O I
暂无
中图分类号
学科分类号
摘要
Hereditary spherocytosis (HS) is the most common inherited hemolytic anemia characterized by the presence of spherical-shaped erythrocytes on the peripheral blood smear, hemolysis, splenomegaly, jaundice, and gallstones. To date, mutations in at least five genes (ANK1, EPB42, SLC4A1, SPTA1, and SPTB) have been found to be associated with different subtypes of HS. Here, we aim to investigate the presence of novel as well as known mutations in 35 Chinese patients with clinically suspected HS. Whole-exome sequencing (WES) has identified 3 patients with SLC4A1, 16 patients with ANK1, and 16 patients with SPTB mutations, including 5 splicing, 12 nonsense, 9 frameshift, 7 missense, and 1 start-loss mutation, indicating that SPTB and ANK1 are the most frequently mutated genes in Chinese HS patients. Among 34 mutations identified, 21 were novel. Most of SPTB and ANK1 mutations were nonsense (8/16) and frameshift (6/16) mutations. By trio analysis of eight families we have confirmed six de novo mutations. In addition, genotype–phenotype analysis was also performed by comparing clinical manifestations among three groups of patients with SPTB, ANK1, and SLC4A1 mutations. It revealed that patients with ANK1 mutations had a significantly higher level of MCV and MCH but lower percentage of spherocytes compared with those carrying SPTB mutations. In conclusion, our results suggested that molecular diagnosis by next-generation sequencing (NGS) is a fast, economic, and accurate way to detect and identify pathogenic alterations of inherited diseases, highlighting the potential usage of NGS in clinical practice.
引用
收藏
页码:427 / 434
页数:7
相关论文
共 110 条
  • [1] Perrotta S(2008)Hereditary spherocytosis Lancet 372 1411-26
  • [2] Gallagher PG(2015)A systematic review of hereditary spherocytosis reported in Chinese biomedical journals from 1978 to 2013 and estimation of the prevalence of the disease using a disease model Intractable Rare Dis Res 4 76-81
  • [3] Mohandas N(2005)Red Cell Membrane Disorders Hematology 2005 13-18
  • [4] Wang C(2011)Hereditary red cell membrane defects: diagnostic and clinical aspects Blood Transfus 9 274-7
  • [5] Cui Y(2013)Hereditary spherocytosis, elliptocytosis, and other red cell membrane disorders Blood Rev 27 167-78
  • [6] Li Y(2007)The molecular basis of hereditary red cell membrane disorders Blood Rev 21 1-20
  • [7] Liu X(2008)Disorders of red cell membrane Br J Haematol 141 367-75
  • [8] Han J(2002)Molecular basis of red cell membrane disorders Acta Haematol 108 210-8
  • [9] Gallagher Patrick G.(1990)Variable clinical severity of hereditary spherocytosis: relation to erythrocytic spectrin concentration, osmotic fragility, and autohemolysis J Pediatr 117 409-16
  • [10] Barcellini W(2016)Mutational characteristics of ANK1 and SPTB genes in hereditary spherocytosis Clin Genet 90 69-78