The complete chloroplast genome of Paeonia rockii (Paeoniaceae), an endangered endemic species to China

被引：0
|
作者：
Guoqing Bai
Hewei Guo
Ning Zhao
Sifeng Li
Ying Zhang
机构：
[1] Xi’an Botanical Garden of Shaanxi Province,Shanyang County Forestry Bureau of Shaanxi Province
[2] Shanyang Wildlife and Natural Forest Protection and Management Center,undefined
[3] Shaanxi Engineering Research Centre for Conservation and Utilization of Botanical Resources,undefined
来源：
Conservation Genetics Resources | 2018年 / 10卷
关键词：
Chloroplast genome; Illumina sequencing; Phylogenetic analysis;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
Paeonia rockii (Paeoniaceae) is an endangered endemic species to China and it is the most important ancestral species of the cultivated tree peonies. Here, the complete chloroplast (cp) genome of P. rockii was obtained by using Illumina pair-end sequencing. The complete cp genome of P. rockii was 152,821 bp, consisting of a pair of inverted repeat (IR) regions (25,648 bp), a small single copy (SSC) region (17,048 bp) and a large single copy (LSC) region (84,477 bp). The chloroplast genome of P. rockii contained 131 genes, including 84 protein-coding genes, 37 tRNA genes and eight rRNA genes. The overall GC content of the whole genome is 38.3%. Phylogenetic analysis of 23 selected chloroplast genomes revealed that P. rockii was closely related to Paeonia obovata and Paeonia sp. Sd0052.
引用
收藏
页码：453 / 456
页数：3
相关论文
共 50 条
  • [1] The complete chloroplast genome of Paeonia rockii (Paeoniaceae), an endangered endemic species to China
    Bai, Guoqing
    Guo, Hewei
    Zhao, Ning
    Li, Sifeng
    Zhang, Ying
    CONSERVATION GENETICS RESOURCES, 2018, 10 (03) : 453 - 456
  • [2] The complete chloroplast genome of Paeonia suffruticosa Andrew (Paeoniaceae)
    Park, Jin Hee
    Chung, Hee
    Yoon, Ki Hoon
    Park, So Hyun
    Gil, Jinsu
    Lee, Jungho
    Lee, Yi
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 1406 - 1407
  • [3] The complete chloroplast genome of Calycanthus chinensis, an endangered species endemic to China
    Xiaodan Chen
    Jia Yang
    Hao Zhang
    Ru Bai
    Xiao Zhang
    Guoqing Bai
    Panfeng Dai
    Guifang Zhao
    Conservation Genetics Resources, 2019, 11 : 55 - 58
  • [4] The complete chloroplast genome of Sauvagesia rhodoleuca, an endangered species endemic to China
    Xie, Xiao
    Huang, Jiashuang
    Zhang, Yonghua
    Zhu, Shanshan
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (08): : 2398 - 2399
  • [5] The complete chloroplast genome of Lilium taliense, an endangered species endemic to China
    Qian Zhang
    Yu Bi
    Mingfang Zhang
    Xuqing Chen
    Fengping Yang
    Jing Xue
    Yunpeng Du
    Xiuhai Zhang
    Conservation Genetics Resources, 2017, 9 : 201 - 203
  • [6] The complete chloroplast genome of Calycanthus chinensis, an endangered species endemic to China
    Chen, Xiaodan
    Yang, Jia
    Zhang, Hao
    Bai, Ru
    Zhang, Xiao
    Bai, Guoqing
    Dai, Panfeng
    Zhao, Guifang
    CONSERVATION GENETICS RESOURCES, 2019, 11 (01) : 55 - 58
  • [7] The complete chloroplast genome of Magnolia omeiensis, an endangered and endemic species in China
    Ling, Li-Zhen
    Zhang, Shu-Dong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 1909 - 1910
  • [8] The complete chloroplast genome of Lilium taliense, an endangered species endemic to China
    Zhang, Qian
    Bi, Yu
    Zhang, Mingfang
    Chen, Xuqing
    Yang, Fengping
    Xue, Jing
    Du, Yunpeng
    Zhang, Xiuhai
    CONSERVATION GENETICS RESOURCES, 2017, 9 (02) : 201 - 203
  • [9] The complete chloroplast genome of Paeonia lactiflora Pall. (Paeoniaceae)
    Lee, Minjee
    Park, Jin Hee
    Gil, Jinsu
    Lee, Jungho
    Lee, Yi
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 2715 - 2716
  • [10] The chloroplast genome of Paeonia decomposita (Paeoniaceae), an endangered wild tree peony from Sichuan, China
    Yongmei Chen
    Qiujie Zhou
    Lijin Sun
    Wei Lun Ng
    Renchao Zhou
    Wei Wu
    Conservation Genetics Resources, 2019, 11 : 59 - 61
12345