Cluster-based segmentation of dual-echo ultra-short echo time images for PET/MR bone localization

被引:25
作者
Delso G. [1 ]
Zeimpekis K. [3 ]
Carl M. [1 ]
Wiesinger F. [4 ]
Hüllner M. [2 ,3 ]
Veit-Haibach P. [2 ,3 ]
机构
[1] GE Healthcare, Waukesha, 53186, WI
[2] Department Medical Radiology, Institute of Diagnostic and Interventional Radiology, University Hospital Zurich, Zurich
[3] Department Medical Radiology, Division of Nuclear Medicine, University Hospital Zurich, Rämistrasse 100, Zurich
[4] GE Global Research, Munich
关键词
Attenuation correction; Bone; Dual-echo; PET/MR; UTE;
D O I
10.1186/2197-7364-1-7
中图分类号
学科分类号
摘要
Background: Magnetic resonance (MR)-based attenuation correction is a critical component of integrated positron emission tomography (PET)/MR scanners. It is generally achieved by segmenting MR images into tissue classes with known attenuation properties (e.g., bone, fat, soft tissue, lung, air). Ultra-short echo time (UTE) have been proposed in the past to locate bone tissue. In this study, tri-modality computed tomography data was used to develop an improved algorithm for the localization of bone in the head and neck. Methods: Twenty patients were scanned using a tri-modality setup. A UTE acquisition with 22-cm transaxial and 24-cm axial field of view was acquired, with a resolution of 1.5 × 1.5 × 2.0 mm3. The sequence consisted of two echoes (30 μs, 1.7 ms) with a flip angle of 10° and 125-kHz bandwidth. The CT images of all patients were classified by thresholding and used to compute maps of the posterior probability of each tissue class, given a pair of UTE echo values. The Jaccard distance was used to compare with CT the bone masks obtained when using this information to segment the UTE datasets. Results: The results show the desired bony structures as a cluster pattern in the space of dual-echo measurements. The clusters obtained for the tissue classes are strongly overlapped, indicating that the MR data will not, regardless of the chosen space partition, be able to completely differentiate the bony and soft structures. The classification obtained by maximizing the posterior probability compared well to previously published methods, providing a more intuitive and robust choice of the final classification threshold. The distance between MR- and CT-based bone masks was 59% on average (0% being a perfect match), compared to 76% and 69% for two previously published methods. Conclusions: The study of tri-modality datasets shows that improved bone tissue classification can be achieved by estimating maps of the posterior probability of voxels belonging to a particular tissue class, given a measured pair of UTE echoes. © 2014, Delso et al.; licensee Springer.
引用
收藏
页码:1 / 13
页数:12
相关论文
共 15 条
  • [1] Martinez-Moller A., Souvatzoglou M., Delso G., Bundschuh R.A., Chefd'hotel C., Ziegler S.I., Navab N., Schwaiger M., Nekolla S.G., Tissue classification as a potential approach for attenuation correction in whole-body PET/MRI: evaluation with PET/CT data, J Nucl Med, 50, pp. 520-526, (2009)
  • [2] Hofmann M., Pichler B., Scholkopf B., Beyer T., Towards quantitative PET/MRI: a review of MR-based attenuation correction techniques, Eur J Nucl Med Mol Imaging, 36, pp. S93-S104, (2009)
  • [3] Du J., Bydder G.M., Qualitative and quantitative ultrashort-TE MRI of cortical bone, NMR Biomed, 26, pp. 489-506, (2013)
  • [4] Bae W.C., Chen P.C., Chung C.B., Masuda K., D'Lima D., Du J., Quantitative ultrashort echo time (UTE) MRI of human cortical bone: correlation with porosity and biomechanical properties, J Bone Miner Res, 27, pp. 848-857, (2012)
  • [5] Keereman V., Fierens Y., Broux T., De Deene Y., Lonneux M., Vandenberghe S., MRI-based attenuation correction for PET/MRI using ultrashort echo time sequences, J Nucl Med, 51, pp. 812-818, (2010)
  • [6] Wang L., Zhong X., Zang L., Tiwari D., Mao H., Ultra-short TE (UTE) imaging of skull and a quantitative comparison of skull images obtained from MRI and CT, Ultra-short TE (UTE) Imaging of Skull and a Quantitative Comparison of Skull Images Obtained from MRI and CT, (2010)
  • [7] Catana C., Van der Kouwe A., Benner T., Hamm C., Michel C.J., Fenchel M., Byars L., Schmand M., Sorensen A.G., MR-Based PET attenuation correction for neurological studies using dual-echo UTE sequences, MR-Based PET Attenuation Correction for Neurological Studies Using Dual-Echo UTE Sequences, (2010)
  • [8] Catana C., van der Kouwe A., Benner T., Michel C.J., Hamm M., Fenchel M., Fischl B., Rosen B., Schmand M., Sorensen A.G., Toward implementing an MRI-based PET attenuation-correction method for neurologic studies on the MR-PET brain prototype, J Nucl Med, 51, pp. 1431-1438, (2010)
  • [9] Johansson A., Karlsson M., Nyholm T., CT substitute derived from MRI sequences with ultrashort echo time, Med Phys, 38, pp. 2708-2714, (2011)
  • [10] Berker Y., Franke J., Salomon A., Palmowski M., Donker H.C., Temur Y., Mottaghy F.M., Kuhl C., Izquierdo-Garcia D., Fayad Z.A., Kiessling F., Schulz V., MRI-based attenuation correction for hybrid PET/MRI systems: a 4-class tissue segmentation technique using a combined ultrashort-echo-time/Dixon MRI sequence, J Nucl Med, 53, pp. 796-804, (2012)