Performance of criteria for selecting evolutionary models in phylogenetics: a comprehensive study based on simulated datasets

被引:0
作者
Arong Luo
Huijie Qiao
Yanzhou Zhang
Weifeng Shi
Simon YW Ho
Weijun Xu
Aibing Zhang
Chaodong Zhu
机构
[1] Chinese Academy of Sciences,Institute of Zoology
[2] Graduate University of Chinese Academy of Sciences,UCD Conway Institute of Biomolecular and Biomedical Sciences
[3] University College Dublin,Centre for Macroevolution and Macroecology, Research School of Biology
[4] Australian National University,School of Biological Sciences
[5] University of Sydney,Zhongbei College
[6] Nanjing Normal University,College of Life Sciences
[7] Capital Normal University,undefined
来源
BMC Evolutionary Biology | / 10卷
关键词
Model Selection; Akaike Information Criterion; Bayesian Information Criterion; Decision Theory; Simulated Dataset;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 117 条
[1]  
Bollback JP(2002)Bayesian model adequacy and choice in phylogenetics Mol Biol Evol 19 1171-1180
[2]  
Lemmon AR(2004)The importance of proper model assumption in Bayesian phylogenetics Syst Biol 53 265-277
[3]  
Moriarty EC(2003)Performance-based selection of likelihood models for phylogeny estimation Syst Biol 52 674-683
[4]  
Minin V(2008)Does choice in model selection affect maximum likelihood analysis? Syst Biol 57 76-85
[5]  
Abdo Z(2000)Parsimony, likelihood, and the role of models in molecular phylogenetics Mol Biol Evol 17 839-850
[6]  
Joyce P(2005)Model selection in phylogenetics Annu Rev Ecol Evol Syst 36 445-466
[7]  
Sullivan J(1976)Science and statistics J Am Stat Assoc 71 791-799
[8]  
Ripplinger J(2001)Selecting the best-fit model of nucleotide substitution Syst Biol 50 580-601
[9]  
Sullivan J(2004)Bayesian phylogenetic model selection using reversible jump Markov Chain Monte Carlo Mol Biol Evol 21 1123-1133
[10]  
Steel M(1994)A codon-based model of nucleotide substitution for protein-coding DNA sequences Mol Biol Evol 11 725-736