Epi-GTBN: an approach of epistasis mining based on genetic Tabu algorithm and Bayesian network

[1] Park MY(2008)Penalized logistic regression for detecting gene interactions Biostatistics. 9 30-50

[2] Hastie T(2017)Eigen-epistasis for detecting gene-gene interactions BMC Bioinformatics 18 54-147

[3] Stanislas V(2016)Functional regression models for epistasis analysis of multiple quantitative traits PLoS Genet 12 45-1173

[4] Dalmasso C(2015)Characterizing gene-gene interactions in a statistical epistasis network of twelve candidate genes for obesity Biodata Mining 8 138-235

[5] Ambroise C(2001)Multifactor-dimensionality reduction reveals high-order interactions among estrogen-metabolism genes in sporadic breast cancer Am J Hum Genet 69 i605-2836

[6] Zhang F(2016)A unified model based multifactor dimensionality reduction framework for detecting gene-gene interactions Bioinformatics. 32 2354-14

[7] Xie D(2017)CMDR based differential evolution identify the epistatic interaction in genome-wide association studies Bioinformatics. 33 1167-511

[8] Liang M(2007)Bayesian inference of epistatic interactions in case-control studies Nat Genet 39 203-37

[9] De R(2016)JBASE: joint Bayesian analysis of subphenotypes and epistasis Bioinformatics. 32 229-641

[10] Hu T(2008)Exploration of gene-gene interaction effects using entropy-based methods Eur J Hum Genet 16 630-10

[1] Park MY(2008)Penalized logistic regression for detecting gene interactions Biostatistics. 9 30-50

[2] Hastie T(2017)Eigen-epistasis for detecting gene-gene interactions BMC Bioinformatics 18 54-147

[3] Stanislas V(2016)Functional regression models for epistasis analysis of multiple quantitative traits PLoS Genet 12 45-1173

[4] Dalmasso C(2015)Characterizing gene-gene interactions in a statistical epistasis network of twelve candidate genes for obesity Biodata Mining 8 138-235

[5] Ambroise C(2001)Multifactor-dimensionality reduction reveals high-order interactions among estrogen-metabolism genes in sporadic breast cancer Am J Hum Genet 69 i605-2836

[6] Zhang F(2016)A unified model based multifactor dimensionality reduction framework for detecting gene-gene interactions Bioinformatics. 32 2354-14

[7] Xie D(2017)CMDR based differential evolution identify the epistatic interaction in genome-wide association studies Bioinformatics. 33 1167-511

[8] Liang M(2007)Bayesian inference of epistatic interactions in case-control studies Nat Genet 39 203-37

[9] De R(2016)JBASE: joint Bayesian analysis of subphenotypes and epistasis Bioinformatics. 32 229-641

[10] Hu T(2008)Exploration of gene-gene interaction effects using entropy-based methods Eur J Hum Genet 16 630-10