共 109 条
[1]
Huson DH(2011)Integrative analysis of environmental sequences using MEGAN4 Genome Res 21 1552-60
[2]
Mitra S(2013)MetaPathways: a modular pipeline for constructing pathway/genome databases from environmental sequence information BMC Bioinforma 14 202-30
[3]
Ruscheweyh HJ(2000)KEGG: kyoto encyclopedia of genes and genomes Nucleic Acids Res 28 27-505
[4]
Weber N(2009)A parsimony approach to biological pathway reconstruction/inference for genomes and metagenomes PLoS Comput Biol 5 e1000465-50
[5]
Schuster SC(2011)Pathway-based functional analysis of metagenomes J Comput Biol 18 495-29
[6]
Konwar KM(2005)Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles Proc Natl Acad Sci U S A 102 15545-22
[7]
Hanson NW(2007)On testing the significance of sets of genes Ann Appl Stat 1 107-23
[8]
Pagé AP(2013)Methods and approaches in the topology-based analysis of biological pathways Front Physiol 4 1-42
[9]
Hallam SJ(2014)Bootstrap-based differential gene expression analysis for RNA-Seq data with and without replicates BMC Genomics 15 S2-6
[10]
Kanehisa M(2011)Combinatorial optimization algorithms for metabolic networks alignments and their applications IJKDB 2 1-7