Integrating pathway knowledge with deep neural networks to reduce the dimensionality in single-cell RNA-seq data

被引:0
作者
Pelin Gundogdu
Carlos Loucera
Inmaculada Alamo-Alvarez
Joaquin Dopazo
Isabel Nepomuceno
机构
[1] Hospital Virgen del Rocio,Clinical Bioinformatics Area. Fundación Progreso y Salud (FPS). CDCA
[2] Hospital Virgen del Rocio,Computational Systems Medicine, Institute of Biomedicine of Seville (IBIS)
[3] Centro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER),Bioinformatics in Rare Diseases (BiER)
[4] FPS,FPS/ELIXIR
[5] Hospital Virgen del Rocío,es
[6] Hospital Virgen del Rocío,Department of Computer Languages and Systems
[7] Universidad de Sevilla,undefined
来源
BioData Mining | / 15卷
关键词
Deep neural network; Signaling pathway; Single cell; scRNA-seq; Gene expression; Transcriptomics; Machine learning;
D O I
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