Codon-optimized DsRed fluorescent protein for use in Mycobacterium tuberculosis

被引:9
作者
Carroll P. [1 ]
Muwanguzi-Karugaba J. [1 ]
Parish T. [1 ,2 ]
机构
[1] Queen Mary University of London, Barts and the London School of Medicine and Dentistry, London
[2] Infectious Disease Research Institute, Seattle, 98102, WA
关键词
Fluorescent protein; Mycobacteria; Reporter system;
D O I
10.1186/s13104-018-3798-3
中图分类号
学科分类号
摘要
Objective: We have previously codon-optimized a number of red fluorescent proteins for use in Mycobacterium tuberculosis (mCherry, tdTomato, Turbo-635). We aimed to expand this repertoire to include DsRed, another widely used and flexible red fluorescent protein. Results: We generated expression constructs with a full length DsRed under the control of one of three strong, constitutive promoters (Phsp60, PrpsA or PG13) for use in mycobacteria. We confirmed that full length DsRed (225 amino acids) was expressed and fluoresced brightly. In contrast to mCherry, truncated versions of DsRed lacking several amino acids at the N-terminus were not functional. Thus, we have expanded the repertoire of optimized fluorescent proteins for mycobacteria. © 2018 The Author(s).
引用
收藏
相关论文
共 19 条
  • [1] Tsien R.Y., The green fluorescent protein, Annu Rev Biochem, 67, pp. 509-544, (1998)
  • [2] Matz M.V., Fradkov A.F., Labas Y.A., Savitsky A.P., Zaraisky A.G., Markelov M.L., Lukyanov S.A., Fluorescent proteins from nonbioluminescent Anthozoa species, Nat Biotechnol, 17, pp. 969-973, (1999)
  • [3] Rodriguez E.A., Campbell R.E., Lin J.Y., Lin M.Z., Miyawaki A., Palmer A.E., Shu X., Zhang J., Tsien R.Y., The growing and glowing toolbox of fluorescent and photoactive proteins, Trends Biochem Sci, 42, pp. 111-129, (2017)
  • [4] Stepanenko O.V., Stepanenko O.V., Shcherbakova D.M., Kuznetsova I.M., Turoverov K.K., Verkhusha V.V., Modern fluorescent proteins: From chromophore formation to novel intracellular applications, BioTechniques, 51, pp. 313-314, (2011)
  • [5] Carroll P., Schreuder L.J., Muwanguzi-Karugaba J., Wiles S., Robertson B.D., Ripoll J., Ward T.H., Bancroft G.J., Schaible U.E., Parish T., Sensitive detection of gene expression in mycobacteria under replicating and non-replicating conditions using optimized far-red reporters, PLoS ONE, 5, (2010)
  • [6] O'Gaora P., Expression of genes in mycobacteria, Mycobacteria Protocols, 101, pp. 261-273, (1998)
  • [7] Andreu N., Zelmer A., Fletcher T., Elkington P.T., Ward T.H., Ripoll J., Parish T., Bancroft G.J., Schaible U., Robertson B.D., Et al., Optimisation of bioluminescent reporters for use with mycobacteria, PLoS ONE, 5, (2010)
  • [8] Zelmer A., Carroll P., Andreu N., Hagens K., Mahlo J., Redinger N., Robertson B.D., Wiles S., Ward T.H., Parish T., Et al., A new in vivo model to test anti-tuberculosis drugs using fluorescent imaging, J Antimicrob Chemother, 67, pp. 1948-1960, (2012)
  • [9] Goude R., Roberts D.M., Parish T., Electroporation of mycobacteria, Methods Mol Biol, 1285, pp. 117-130, (2015)
  • [10] Telford W.G., Hawley T., Subach F., Verkhusha V., Hawley R.G., Flow cytometry of fluorescent proteins, Methods, 57, pp. 318-330, (2012)