ROTAS: a rotamer-dependent, atomic statistical potential for assessment and prediction of protein structures

[1] Tanaka S(1976)Medium- and long-range interaction parameters between amino acids for predicting three-dimensional structures of proteins Macromolecules 9 945-950

[2] Scheraga HA(1985)Estimation of effective interresidue contact energies from protein crystal structures: quasi-chemical approximation Macromolecules 18 534-552

[3] Miyazawa S(1990)Calculation of conformational ensembles from potentials of mean force. an approach to the knowledge-based prediction of local structures in globular proteins J Mol Biol 213 859-883

[4] Jernigan RL(1995)Knowledge-based potentials for proteins Curr Opin Struct Biol 5 229-235

[5] Sippl MJ(1993)Generating and testing protein folds Curr Opin Struct Biol 3 247-259

[6] Sippl MJ(1997)Novel knowledge-based mean force potential at atomic level J Mol Biol 267 207-222

[7] Wodak SJ(1996)Statistical potentials extracted from protein structures: how accurate are they? J Mol Biol 257 457-469

[8] Rooman MJ(1997)Statistical potentials extracted from protein structures: are these meaningful potentials? J Chem Phys 107 3698-89

[9] Melo F(2010)Potentials of mean force for protein structure prediction vindicated, formalized and generalized PLoS One 5 e13714-369

[10] Feytmans E(1992)A new approach to protein fold recognition Nature 358 86-171

[1] Tanaka S(1976)Medium- and long-range interaction parameters between amino acids for predicting three-dimensional structures of proteins Macromolecules 9 945-950

[2] Scheraga HA(1985)Estimation of effective interresidue contact energies from protein crystal structures: quasi-chemical approximation Macromolecules 18 534-552

[3] Miyazawa S(1990)Calculation of conformational ensembles from potentials of mean force. an approach to the knowledge-based prediction of local structures in globular proteins J Mol Biol 213 859-883

[4] Jernigan RL(1995)Knowledge-based potentials for proteins Curr Opin Struct Biol 5 229-235

[5] Sippl MJ(1993)Generating and testing protein folds Curr Opin Struct Biol 3 247-259

[6] Sippl MJ(1997)Novel knowledge-based mean force potential at atomic level J Mol Biol 267 207-222

[7] Wodak SJ(1996)Statistical potentials extracted from protein structures: how accurate are they? J Mol Biol 257 457-469

[8] Rooman MJ(1997)Statistical potentials extracted from protein structures: are these meaningful potentials? J Chem Phys 107 3698-89

[9] Melo F(2010)Potentials of mean force for protein structure prediction vindicated, formalized and generalized PLoS One 5 e13714-369

[10] Feytmans E(1992)A new approach to protein fold recognition Nature 358 86-171