Structure-Based Virtual Screening, Molecular Docking, Molecular Dynamics Simulation of EGFR for the Clinical Treatment of Glioblastoma

被引:0
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作者
Anushka Bhrdwaj
Mohnad Abdalla
Aditi Pande
Maddala Madhavi
Ishita Chopra
Lovely Soni
Natchimuthu Vijayakumar
Umesh Panwar
Mohd. Aqueel Khan
Leena Prajapati
Deepika Gujrati
Pranoti Belapurkar
Sarah Albogami
Tajamul Hussain
Chandrabose Selvaraj
Anuraj Nayarisseri
Sanjeev Kumar Singh
机构
[1] In silico Research Laboratory,Key Laboratory of Chemical Biology (Ministry of Education), Department of Pharmaceutics, School of Pharmaceutical Sciences
[2] Cheeloo College of Medicine,Department of Zoology
[3] Shandong University,Department of Physics
[4] Osmania University,Computer Aided Drug Designing and Molecular Modeling Lab, Department of Bioinformatics
[5] M.Kumarasamy College of Engineering,Institute of Genetics and Hospital for Genetic Diseases
[6] Alagappa University,Department of Biosciences
[7] Osmania University,Department of Biotechnology, College of Science
[8] Acropolis Institute,Research Chair for Biomedical Applications of Nanomaterials, Biochemistry Department, College of Science
[9] Taif University,Center of Excellence in Biotechnology Research, College of Science
[10] King Saud University,Center for Transdisciplinary Research, Department of Pharmacology, Saveetha College of Dental and Hospitals, Saveetha Institute of Medical and Technical Sciences (SIMATS)
[11] King Saud University,Bioinformatics Research Laboratory
[12] Saveetha University,Department of Data Sciences, Centre of Biomedical Research
[13] LeGene Biosciences Pvt Ltd,undefined
[14] SGPGIMS Campus,undefined
来源
关键词
EGFR; Glioblastoma; Virtual screening; Molecular docking; MD simulation; R programming; ADMET; Boiled egg plot;
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摘要
Glioblastoma (GBM) is a WHO Grade IV tumor with poor visibility, a high risk of comorbidity, and exhibit limited treatment options. Resurfacing from second-rate glioma was originally classified as either mandatory or optional. Recent interest in personalized medicine has motivated research toward biomarker stratification-based individualized illness therapy. GBM biomarkers have been investigated for their potential utility in prognostic stratification, driving the development of targeted therapy and customizing therapeutic treatment. Due to the availability of a specific EGFRvIII mutational variation with a clear function in glioma-genesis, recent research suggests that EGFR has the potential to be a prognostic factor in GBM, while others have shown no clinical link between EGFR and survival. The pre-existing pharmaceutical lapatinib (PubChem ID: 208,908) with a higher affinity score is used for virtual screening. As a result, the current study revealed a newly screened chemical (PubChem CID: 59,671,768) with a higher affinity than the previously known molecule. When the two compounds are compared, the former has the lowest re-rank score. The time-resolved features of a virtually screened chemical and an established compound were investigated using molecular dynamics simulation. Both compounds are equivalent, according to the ADMET study. This report implies that the virtual screened chemical could be a promising Glioblastoma therapy.
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页码:5094 / 5119
页数:25
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