Arabiibacter massiliensis gen. nov. sp. nov., New Anaerobic Bacterium Isolated from the Human Gut

被引:0
作者
Cheikh Ibrahima Lo
Sory Ibrahima Traore
Awa Diop
Melhem Bilen
Esam Ibraheem Azhar
Fehmida Bibi
Asif Jiman-Fatani
Muhammad Yasir
Jean-Christophe Lagier
Didier Raoult
Florence Fenollar
Pierre-Edouard Fournier
机构
[1] UMR VITROME,Special Infectious Agents Unit, King Fahd Medical Research Center
[2] Aix Marseille Univ,Department of Medical Laboratory Technology, Faculty of Medicine
[3] IRD,undefined
[4] AP-HM,undefined
[5] SSA,undefined
[6] IHU-Méditerranée Infection,undefined
[7] UMR MEPHI,undefined
[8] Aix Marseille Univ,undefined
[9] IRD,undefined
[10] AP-HM,undefined
[11] King Abdulaziz University,undefined
[12] King Abdulaziz University,undefined
来源
Current Microbiology | 2022年 / 79卷
关键词
D O I
暂无
中图分类号
学科分类号
摘要
Using microbial culturomics, we were able to isolate strain Marseille-P3078 from a stool sample of a healthy 50-year-old Saudi Arabian woman. To this end, we used taxonogenomics that combines phenotypic, biochemical and genomic analyses, to describe this bacterium. Cells from strain Marseille-P3078 are anaerobic and Gram-negative rods that are motile and unable to sporulate. Its genome size is 3,377,914-bp-long with a 66.33 mol% G + C content. Based on its phenotypic and genomic features, including a 94.6% 16S rRNA similarity with Paraeggerthella hongkongensis strain JCM 14552, its closest phylogenetic neighbor withstanding in nomenclature, we propose that strain Marseille-P3078T (= CSUR P3078 = DSM 104007) is the representative strain of a new genus for which we propose the name Arabiibacter massiliensis gen. nov., sp. nov.
引用
收藏
相关论文
共 87 条
  • [1] Shreiner AB(2015)The gut microbiome in health and in disease Curr Opin Gastroenterol 31 69-75
  • [2] Kao JY(2014)The role of metagenomics in understanding the human microbiome in health and disease Virulence 5 413-423
  • [3] Young VB(2017)Gut microbiota and malnutrition Microb Pathog 106 127-138
  • [4] Martín R(2015)The microbiota and microbiome in aging: potential implications in health and age-related diseases J Am Geriatr Soc 63 776-781
  • [5] Miquel S(2018)Repertoire of bacterial species cultured from the human oral cavity and respiratory tract Future Microbiol 13 1611-1624
  • [6] Langella P(2012)Microbial culturomics: paradigm shift in the human gut microbiome study Clin Microbiol Infect 18 1185-1193
  • [7] Bermúdez-Humarán LG(2012)Human gut microbiota: repertoire and variations Front Cell Infect Microbiol 16 540-550
  • [8] Million M(2018)Culturing the human microbiota and culturomics Nat Rev Microbiol 111 2107-2128
  • [9] Diallo A(2018)Description of Antonie Van Leeuwenhoek 8 154-163
  • [10] Raoult D(2015), gen. nov., sp. nov., a new genus isolated from the gut microbiota of an obese patient and reclassification of New Microbes New Infect 77 2008-2015