Classification of microarray data using gene networks

被引:0
作者
Franck Rapaport
Andrei Zinovyev
Marie Dutreix
Emmanuel Barillot
Jean-Philippe Vert
机构
[1] Service de Bioinformatique,lnstitut Curie
[2] Centre for Computational Biology,Ecole des Mines de Paris
[3] Centre Universitaire,lnstitut Curie, CNRS
来源
BMC Bioinformatics | / 8卷
关键词
Support Vector Machine; Gene Expression Data; Gene Network; Metabolic Network; Spectral Decomposition;
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[1]  
Consortium TGO(2000)Gene ontology: tool for the unification of biology. The Gene Ontology Consortium Nat Genet 25 25-29
[2]  
Hosack D(2003)Identifying biological themes within lists of genes with EASE Genome Biology R70 1-7
[3]  
Dennis G(2005)Signal transduction pathway profiling of individual tumor samples BMC Bioinformatics 6 163-195
[4]  
Sherman B(2001)Multistationarity, the basis of cell differentiation and memory. II. Logical analysis of regulatory networks in terms of feedback circuits Chaos 11 180-49
[5]  
Lane H(2004)Modeling and analysis of heterogeneous regulation in biological networks J Comput Biol 11 1034-435
[6]  
Lempicki R(2005)Pathways to the analysis of microarray data Trends in Biotechnology 23 429-34
[7]  
Breslin T(2005)Bioinformatic methods for integrating whole-genome expression results into cellular networks Drug Discov Today 10 727-9
[8]  
Krogh M(2005)Expansion of the BioCyc collection of pathway/genome databases to 160 genomes Nucleic Acids Res 33 6083-II244
[9]  
Peterson C(2003)Extracting active pathways from gene expression data Bioinformatics 19 II238-7
[10]  
Troein C(2004)Calculating the statistical significance of changes in pathway activity from gene expression data Statistical Applications in Genetics and Molecular Biology 3 Article 16-94