Critical assessment of sequence-based protein-protein interaction prediction methods that do not require homologous protein sequences

被引:0
|
作者
Yungki Park
机构
[1] University of Texas at Austin,Institute of Cellular and Molecular Biology (MBB 3 210B), Center for Systems and Synthetic Biology
来源
关键词
Gene Ontology; Prediction Method; Protein Pair; Consensus Method; Consensus Approach;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [21] Sequence-Based Prediction of Protein-Protein Interactions by Means of Rotation Forest and Autocorrelation Descriptor
    Xia, Jun-Feng
    Han, Kyungsook
    Huang, De-Shuang
    PROTEIN AND PEPTIDE LETTERS, 2010, 17 (01): : 137 - 145
  • [22] Assessing sequence-based protein-protein interaction predictors for use in therapeutic peptide engineering
    Charih, Francois
    Biggar, Kyle K.
    Green, James R.
    SCIENTIFIC REPORTS, 2022, 12 (01)
  • [23] Eukaryotic protein subcellular localization prediction based on sequence conservation and protein-protein interaction
    Zhang Song
    Xia Xue-Feng
    Shen Jin-Cheng
    Sun Zhi-Rong
    PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 2008, 35 (05) : 531 - 535
  • [24] Advances in Computational Methods for Protein-Protein Interaction Prediction
    Xian, Lei
    Wang, Yansu
    ELECTRONICS, 2024, 13 (06)
  • [25] Sequence-based Protein-Protein Interaction Prediction using Greedy Layer-Wise Training of Deep Neural Networks
    Hanggara, Faruq Sandi
    Anam, Khairul
    CLIMATE CHANGE AND SUSTAINABILITY ENGINEERING IN ASEAN 2019, 2020, 2278
  • [26] A comprehensive assessment of sequence-based and template-based methods for protein contact prediction
    Wu, Sitao
    Zhang, Yang
    BIOINFORMATICS, 2008, 24 (07) : 924 - 931
  • [27] Sequence-Based Prediction of Protein-Protein Binding Residues in Alpha-Helical Membrane Proteins
    Xiao, Feng
    Shen, Hongbin
    PATTERN RECOGNITION (CCPR 2014), PT II, 2014, 484 : 419 - 427
  • [28] HomPPI: a class of sequence homology based protein-protein interface prediction methods
    Xue, Li C.
    Dobbs, Drena
    Honavar, Vasant
    BMC BIOINFORMATICS, 2011, 12
  • [29] HomPPI: a class of sequence homology based protein-protein interface prediction methods
    Li C Xue
    Drena Dobbs
    Vasant Honavar
    BMC Bioinformatics, 12
  • [30] Prediction of membrane protein types by fusing protein-protein interaction and protein sequence information
    Zhang, Xiaolin
    Chen, Lei
    BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS, 2020, 1868 (12):