In silico and network pharmacology analysis of fucosterol: a potent anticancer bioactive compound against HCC

被引:0
|
作者
Singh, Kajal [1 ]
Kumar, Pradeep [2 ]
Singh, Amit Kumar [3 ]
Singh, Nancy [1 ]
Singh, Sakshi [4 ]
Tiwari, Kavindra Nath [2 ]
Agrawal, Shreni [5 ]
Das, Richa [5 ]
Singh, Anuradha [1 ]
Ram, Bhuwal [6 ]
Tripathi, Amit Kumar [7 ]
Mishra, Sunil Kumar [3 ]
机构
[1] Galgotias Univ, Dept Biosci, Greater Noida, Uttar Pradesh, India
[2] Banaras Hindu Univ, Dept Bot, MMV, Varanasi 221005, Uttar Pradesh, India
[3] Banaras Hindu Univ, Indian Inst Technol, Dept Pharmaceut Engn & Technol, Varanasi 221005, UP, India
[4] Parul Univ, Parul Inst Appl Sci, Dept Biotechnol, Vadodara 391760, Gujarat, India
[5] Banasthali Vidhyapith, Dept Biosci & Biotechnol, Tonk, Rajsthan, India
[6] Banaras Hindu Univ, Dept Dravyaguna, IMS, Varanasi 221005, Uttar Pradesh, India
[7] Galgotias Univ, Sch Basic & Appl Sci, Greater Noida 203201, Uttar Pradesh, India
关键词
Fucosterol; Hub gene; HCC; ESR1; GeneCard; Gene ontology; HEPATOCELLULAR-CARCINOMA; ANDROGEN RECEPTOR; NUCLEAR RECEPTORS; CELLS; TUMOR; FUTURE; ALPHA; GENE;
D O I
10.1007/s12032-024-02374-w
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
The Fucaceae family of marine brown algae includes Ascophyllum nodosum. Fucosterol (FSL) is a unique bioactive component that was identified through GC-MS analysis of the hydroalcoholic extract of A. nodosum. Fucosterol's mechanism of action towards hepatocellular cancer was clarified using network pharmacology and docking study techniques. The probable target gene of FSL has been predicted using the TargetNet and SwissTargetPred databases. GeneCards and the DisGNet database were used to check the targeted genes of FSL. By using the web programme Venny 2.1, the overlaps of FSL and HCC disease demonstrated that 18 genes (1.3%) were obtained as targeted genes Via the STRING database, a protein-protein interaction (PPI) network with 18 common target genes was constructed. With the aid of CytoNCA, hub genes were screened using the Cytoscape software, and the targets' hub genes were exported into the ShinyGo online tool for study of KEGG and gene ontology enrichment. Using the software AutoDock, a hub gene molecular docking study was performed. Ten genes, including AR, CYP19A1, ESR1, ESR2, TNF, PPARA, PPARG, HMGCR, SRC, and IGF1R, were obtained. The 10 targeted hubs docked with FSL successfully. The active components FSL of ASD, the FSL, are engaged in fatty liver disease, cancer pathways, and other signalling pathways, which could prove beneficial for the management of HCC.
引用
收藏
页数:14
相关论文
共 50 条
  • [31] Effective Material Basis and Mechanism Analysis of Compound Banmao Capsule against Tumors Using Integrative Network Pharmacology and Molecular Docking
    He, Tian-Mu
    Liu, Jing-Xian
    Duan, Can-Can
    Li, Xiao-Fei
    Zhang, Jian-Yong
    EVIDENCE-BASED COMPLEMENTARY AND ALTERNATIVE MEDICINE, 2021, 2021
  • [32] Study on the bioactive ingredients and mechanism of Huangqi against diabetic retinopathy based on network pharmacology and experimental verification
    Lin, Xiaohui
    Bao, Min
    Zhang, Xiaohui
    Sa, Qirula
    Jiao, Chenxu
    Zhang, Dingyi
    Han, Jing
    JOURNAL OF THE CHINESE MEDICAL ASSOCIATION, 2024, 87 (08) : 789 - 798
  • [33] Diterpenes/Diterpenoids and Their Derivatives as Potential Bioactive Leads against Dengue Virus: A Computational and Network Pharmacology Study
    Khan, Rasel Ahmed
    Hossain, Rajib
    Siyadatpanah, Abolghasem
    Al-Khafaji, Khattab
    Khalipha, Abul Bashar Ripon
    Dey, Dipta
    Asha, Umma Hafsa
    Biswas, Partha
    Saikat, Abu Saim Mohammad
    Chenari, Hadi Ahmadi
    Wilairatana, Polrat
    Islam, Muhammad Torequl
    MOLECULES, 2021, 26 (22):
  • [34] Identifying the Best Anticancer Agent Combination in TACE for HCC Patients: A Network Meta-analysis
    Guo, Tao
    Wu, Ping
    Liu, Pengpeng
    Chen, Baiyang
    Jiang, Xiang
    Gu, Yang
    Liu, Zhisu
    Li, Zhen
    JOURNAL OF CANCER, 2018, 9 (15): : 2640 - 2649
  • [35] A Comprehensive Understanding of the Anticancer Mechanisms of FDY2004 Against Cervical Cancer Based on Network Pharmacology
    Lee, Ho-Sung
    Lee, In-Hee
    Kang, Kyungrae
    Park, Sang-In
    Jung, Minho
    Yang, Seung Gu
    Kwon, Tae-Wook
    Lee, Dae-Yeon
    NATURAL PRODUCT COMMUNICATIONS, 2021, 16 (03)
  • [36] Graph theoretical network analysis, in silico exploration, and validation of bioactive compounds from Cynodon dactylon as potential neuroprotective agents against α-synuclein
    Rajeshkumar, Raja Rajeswari
    Kumar, Banoth Karan
    Pavadai, Parasuraman
    Panneerselvam, Theivendren
    Sundar, Krishnan
    Ammunje, Damodar Nayak
    Pandian, Sureshbabu Ram Kumar
    Murugesan, Sankaranarayanan
    Kabilan, Shanmugampillai Jeyarajaguru
    Kunjiappan, Selvaraj
    BIOIMPACTS, 2022, : 487 - 499
  • [37] Systemic Analysis of the Anticancer Effects of Sijunzi Decoction on Gastric Cancer Based on Network Pharmacology
    Li, Yuejun
    Wang, Hong
    Liao, Linli
    Tang, Ping
    He, Haihui
    Liu, Lingzhi
    Yan, Junfeng
    Peng, Qinghua
    NATURAL PRODUCT COMMUNICATIONS, 2022, 17 (06)
  • [38] Integrating network pharmacology, in silico molecular docking and experimental validation to explain the anticancer, apoptotic, and anti-metastatic effects of cosmosiin natural product against human lung carcinoma
    Gu, Qin
    Pan, Xiaofei
    Ding, Hui
    He, Yuan
    Liu, Kan
    TURKISH JOURNAL OF BIOCHEMISTRY-TURK BIYOKIMYA DERGISI, 2025,
  • [39] Chemical analysis and in silico anticancer and anti-inflammatory potentials of bioactive compounds from Moringaoleifera seed oil
    Apeh, Victor O.
    Asogwa, Emeka
    Chukwuma, Felicia, I
    Okonkwo, Obiora F.
    Nwora, Florence
    Uke, Rosemary
    ADVANCES IN TRADITIONAL MEDICINE, 2022, 22 (01) : 59 - 74
  • [40] Chemical analysis and in silico anticancer and anti-inflammatory potentials of bioactive compounds from Moringaoleifera seed oil
    Victor O. Apeh
    Emeka Asogwa
    Felicia I. Chukwuma
    Obiora F. Okonkwo
    Florence Nwora
    Rosemary Uke
    Advances in Traditional Medicine, 2022, 22 : 59 - 74