Identification and characterization of novel and conserved microRNAs in several tissues of the Chinese rare minnow (Gobiocypris rarus) based on illumina deep sequencing technology

被引:0
作者
Xiangsheng Hong
Jianhui Qin
Rui Chen
Lilai Yuan
Jinmiao Zha
Zijian Wang
机构
[1] Research Center for Eco-Environmental Sciences,Key Laboratory of Drinking Water Science and Technology
[2] Chinese Academy of Sciences,Key Laboratory of Freshwater Animal Breeding, Ministry of Agriculture, College of Fisheries
[3] Huazhong Agriculture University,Beijing Key Laboratory of Industrial Wastewater Treatment and Reuse
[4] Research Center for Eco-Environmental Sciences,State Key Laboratory of Environmental Aquatic Chemistry
[5] Chinese Academy of Sciences,undefined
[6] Research Center for Eco-Environmental Sciences,undefined
[7] Chinese Academy of Sciences,undefined
来源
BMC Genomics | / 17卷
关键词
microRNA; Deep sequencing; Target prediction; IsomiRs;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 20 条
  • [1] Identification and characterization of novel and conserved microRNAs in several tissues of the Chinese rare minnow (Gobiocypris rarus) based on illumina deep sequencing technology
    Hong, Xiangsheng
    Qin, Jianhui
    Chen, Rui
    Yuan, Lilai
    Zha, Jinmiao
    Wang, Zijian
    BMC GENOMICS, 2016, 17
  • [2] Identification and characterization of conserved and novel microRNAs in Xanthoceras sorbifolium via deep sequencing
    Quanxin Bi
    Bin Guo
    Dongxu Zhang
    Wenbin Guan
    Genes & Genomics, 2015, 37 : 281 - 286
  • [3] Identification and characterization of conserved and novel microRNAs in Xanthoceras sorbifolium via deep sequencing
    Bi, Quanxin
    Guo, Bin
    Zhang, Dongxu
    Guan, Wenbin
    GENES & GENOMICS, 2015, 37 (03) : 281 - 286
  • [4] Identification and characterization of known and novel microRNAs in three tissues of Chinese giant salamander base on deep sequencing approach
    Huang, Yong
    Ren, Hong Tao
    Xiong, Jian Li
    Gao, Xiao Chan
    Sun, Xi Hong
    GENOMICS, 2017, 109 (3-4) : 258 - 264
  • [5] Identification of the conserved and novel microRNAs by deep sequencing and prediction of their targets in Topmouth culter
    Huang, Yong
    Gong, Wangbao
    Ren, Hongtao
    Xiong, Jianli
    Gao, Xiaochan
    Sun, Xihong
    GENE, 2017, 626 : 298 - 304
  • [6] Identification of conserved and novel microRNAs in Catharanthus roseus by deep sequencing and computational prediction of their potential targets
    Prakash, Pravin
    Ghosliya, Dolly
    Gupta, Vikrant
    GENE, 2015, 554 (02) : 181 - 195
  • [7] Deep Illumina sequencing reveals conserved and novel microRNAs in grass carp in response to grass carp reovirus infection
    Libo He
    Aidi Zhang
    Pengfei Chu
    Yongming Li
    Rong Huang
    Lanjie Liao
    Zuoyan Zhu
    Yaping Wang
    BMC Genomics, 18
  • [8] Deep Illumina sequencing reveals conserved and novel microRNAs in grass carp in response to grass carp reovirus infection
    He, Libo
    Zhang, Aidi
    Chu, Pengfei
    Li, Yongming
    Huang, Rong
    Liao, Lanjie
    Zhu, Zuoyan
    Wang, Yaping
    BMC GENOMICS, 2017, 18
  • [9] Genome-wide identification and characterization of conserved and novel microRNAs in grass carp (Ctenopharyngodon idella) by deep sequencing
    Gong, Wangbao
    Huang, Yong
    Xie, Jun
    Wang, Guangjun
    Yu, Deguang
    Sun, Xihong
    COMPUTATIONAL BIOLOGY AND CHEMISTRY, 2017, 68 : 92 - 100
  • [10] Identification by deep sequencing and profiling of conserved and novel hickory microRNAs involved in the graft process
    Xiaojiao Sima
    Bo Jiang
    Jia Fang
    Yongqin He
    Zhongxiang Fang
    Saravana Kumar KM
    Wei Ren
    Lingling Qiu
    Xiaomin Chen
    Bingsong Zheng
    Plant Biotechnology Reports, 2015, 9 : 115 - 124