Control of transposable elements in Arabidopsis thaliana

被引：0
|
作者：
Hidetaka Ito
Tetsuji Kakutani
机构：
[1] Hokkaido University,Faculty of Science
[2] National Institute of Genetics,Department of Integrated Genetics
来源：
Chromosome Research | 2014年 / 22卷
关键词：
Epigenetics; Genomics; DNA methylation; Heterochromatin;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
Arabidopsis thaliana serves as a very good model organism to investigate the control of transposable elements (TEs) by genetic and genomic approaches. As TE movements are potentially deleterious to the hosts, hosts silence TEs by epigenetic mechanisms, such as DNA methylation. DNA methylation is controlled by DNA methyltransferases and other regulators, including histone modifiers and chromatin remodelers. RNAi machinery directs DNA methylation to euchromatic TEs, which is under developmental control. In addition to the epigenetic controls, some TEs are controlled by environmental factors. TEs often affect expression of nearby genes, providing evolutionary sources for epigenetic, developmental, and environmental gene controls, which could even be beneficial for the host.
引用
收藏
页码：217 / 223
页数：6
相关论文
共 50 条
  • [1] Control of transposable elements in Arabidopsis thaliana
    Ito, Hidetaka
    Kakutani, Tetsuji
    CHROMOSOME RESEARCH, 2014, 22 (02) : 217 - 223
  • [2] Transposable Elements Contribute to the Adaptation of Arabidopsis thaliana
    Li, Zi-Wen
    Hou, Xing-Hui
    Chen, Jia-Fu
    Xu, Yong-Chao
    Wu, Qiong
    Gonzalez, Josefa
    Guo, Ya-Long
    GENOME BIOLOGY AND EVOLUTION, 2018, 10 (08): : 2140 - 2150
  • [3] Molecular paleontology of transposable elements from Arabidopsis thaliana
    Vladimir V. Kapitonov
    Jerzy Jurka
    Genetica, 1999, 107 : 27 - 37
  • [4] Molecular paleontology of transposable elements from Arabidopsis thaliana
    Kapitonov, VV
    Jurka, J
    GENETICA, 1999, 107 (1-3) : 27 - 37
  • [5] The Contribution of Transposable Elements to Expressed Coding Sequence in Arabidopsis thaliana
    Lockton, Steven
    Gaut, Brandon S.
    JOURNAL OF MOLECULAR EVOLUTION, 2009, 68 (01) : 80 - 89
  • [6] The Contribution of Transposable Elements to Expressed Coding Sequence in Arabidopsis thaliana
    Steven Lockton
    Brandon S. Gaut
    Journal of Molecular Evolution, 2009, 68 : 80 - 89
  • [7] Population and evolutionary dynamics of Helitron transposable elements in Arabidopsis thaliana
    Hollister, Jesse D.
    Gaut, Brandon S.
    MOLECULAR BIOLOGY AND EVOLUTION, 2007, 24 (11) : 2515 - 2524
  • [8] Epigenetic regulation of intragenic transposable elements impacts gene transcription in Arabidopsis thaliana
    Le, Tu N.
    Miyazaki, Yuji
    Takuno, Shohei
    Saze, Hidetoshi
    NUCLEIC ACIDS RESEARCH, 2015, 43 (08) : 3911 - 3921
  • [9] Transposable elements and small RNAs contribute to gene expression divergence between Arabidopsis thaliana and Arabidopsis lyrata
    Hollister, Jesse D.
    Smith, Lisa M.
    Guo, Ya-Long
    Ott, Felix
    Weigel, Detlef
    Gaut, Brandon S.
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2011, 108 (06) : 2322 - 2327
  • [10] Non-random association of transposable elements with duplicated genomic blocks in Arabidopsis thaliana
    Hughes, AL
    Friedman, R
    Ekollu, V
    Rose, JR
    MOLECULAR PHYLOGENETICS AND EVOLUTION, 2003, 29 (03) : 410 - 416
12345