The Taxus genome provides insights into paclitaxel biosynthesis

被引:0
|
作者
Xingyao Xiong
Junbo Gou
Qinggang Liao
Yanlin Li
Qian Zhou
Guiqi Bi
Chong Li
Ran Du
Xiaotong Wang
Tianshu Sun
Lvjun Guo
Haifei Liang
Pengjun Lu
Yaoyao Wu
Zhonghua Zhang
Dae-Kyun Ro
Yi Shang
Sanwen Huang
Jianbin Yan
机构
[1] Hunan Agricultural University,College of Horticulture
[2] Chinese Academy of Agricultural Sciences,Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Shenzhen Key Laboratory of Agricultural Synthetic Biology, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultu
[3] Ministry of Education,Engineering Research Center for Horticultural Crop Germplasm Creation and New Variety Breeding
[4] Peng Cheng Laboratory Artificial Intelligence Research Center No. 2,MOE Key Laboratory of Bioinformatics, Tsinghua
[5] Tsinghua University,Peking Joint Center for Life Sciences, School of Life Sciences
[6] Qingdao Agricultural University,College of Horticulture
[7] University of Calgary,Department of Biological Sciences
[8] Yunnan Normal University,The AGISCAAS
来源
Nature Plants | 2021年 / 7卷
关键词
D O I
暂无
中图分类号
学科分类号
摘要
The ancient gymnosperm genus Taxus is the exclusive source of the anticancer drug paclitaxel, yet no reference genome sequences are available for comprehensively elucidating the paclitaxel biosynthesis pathway. We have completed a chromosome-level genome of Taxus chinensis var. mairei with a total length of 10.23 gigabases. Taxus shared an ancestral whole-genome duplication with the coniferophyte lineage and underwent distinct transposon evolution. We discovered a unique physical and functional grouping of CYP725As (cytochrome P450) in the Taxus genome for paclitaxel biosynthesis. We also identified a gene cluster for taxadiene biosynthesis, which was formed mainly by gene duplications. This study will facilitate the elucidation of paclitaxel biosynthesis and unleash the biotechnological potential of Taxus.
引用
收藏
页码:1026 / 1036
页数:10
相关论文
共 50 条
  • [41] Genome analysis of Taraxacum kok-saghyz Rodin provides new insights into rubber biosynthesis
    Tao Lin
    Xia Xu
    Jue Ruan
    Shizhong Liu
    Shigang Wu
    Xiujuan Shao
    Xiaobo Wang
    Lin Gan
    Bi Qin
    Yushuang Yang
    Zhukuan Cheng
    Suhua Yang
    Zhonghua Zhang
    Guosheng Xiong
    Sanwen Huang
    Hong Yu
    Jiayang Li
    National Science Review, 2018, 5 (01) : 78 - 87
  • [42] Genome analysis of Taraxacum kok-saghyz Rodin provides new insights into rubber biosynthesis
    Lin, Tao
    Xu, Xia
    Ruan, Jue
    Liu, Shizhong
    Wu, Shigang
    Shao, Xiujuan
    Wang, Xiaobo
    Gan, Lin
    Qin, Bi
    Yang, Yushuang
    Cheng, Zhukuan
    Yang, Suhua
    Zhang, Zhonghua
    Xiong, Guosheng
    Huang, Sanwen
    Yu, Hong
    Li, Jiayang
    NATIONAL SCIENCE REVIEW, 2018, 5 (01) : 78 - 87
  • [43] Chromosome-level genome of Himalayan yew provides insights into the origin and evolution of the paclitaxel biosynthetic pathway
    Cheng, Jian
    Wang, Xiao
    Liu, Xiaonan
    Zhu, Xiaoxi
    Li, Zihe
    Chu, Huanyu
    Wang, Qian
    Lou, QianQian
    Cai, Bijun
    Yang, Yiqun
    Lu, Xiaoyun
    Peng, Kai
    Liu, Dingyu
    Liu, Yuwan
    Lu, Lina
    Liu, Huan
    Yang, Ting
    Ge, Qijin
    Shi, Chengcheng
    Liu, Guichun
    Dong, Zhiwei
    Xu, Xun
    Wang, Wen
    Jiang, Huifeng
    Ma, Yanhe
    MOLECULAR PLANT, 2021, 14 (07) : 1199 - 1209
  • [44] The chromosome-level genome assembly of Gentiana dahurica (Gentianaceae) provides insights into gentiopicroside biosynthesis
    Li, Ting
    Yu, Xi
    Ren, Yumeng
    Kang, Minghui
    Yang, Wenjie
    Feng, Landi
    Hu, Quanjun
    DNA RESEARCH, 2022, 29 (02)
  • [45] Chromosome-Level Genome Assembly of Bupleurum chinense DC Provides Insights Into the Saikosaponin Biosynthesis
    Zhang, Quanfang
    Li, Min
    Chen, Xueyan
    Liu, Guoxia
    Zhang, Zhe
    Tan, Qingqing
    Hu, Yue
    Fan, Yangyang
    Liu, Yanyan
    Zhu, Tongshan
    Yang, Xue
    Yue, Mingming
    Bu, Xun
    Zhang, Yongqing
    FRONTIERS IN GENETICS, 2022, 13
  • [46] Chromosome-level assembly of the Neolamarckia cadamba genome provides insights into the evolution of cadambine biosynthesis
    Zhao, Xiaolan
    Hu, Xiaodi
    OuYang, Kunxi
    Yang, Jing
    Que, Qingmin
    Long, Jianmei
    Zhang, Jianxia
    Zhang, Tong
    Wang, Xue
    Gao, Jiayu
    Hu, Xinquan
    Yang, Shuqi
    Zhang, Lisu
    Li, Shufen
    Gao, Wujun
    Li, Benping
    Jiang, Wenkai
    Nielsen, Erik
    Chen, Xiaoyang
    Peng, Changcao
    PLANT JOURNAL, 2022, 109 (04): : 891 - 908
  • [47] The chromosome-based lavender genome provides new insights into Lamiaceae evolution and terpenoid biosynthesis
    Li, Jingrui
    Wang, Yiming
    Dong, Yanmei
    Zhang, Wenying
    Wang, Di
    Bai, Hongtong
    Li, Kui
    Li, Hui
    Shi, Lei
    HORTICULTURE RESEARCH, 2021, 8 (01)
  • [48] Chromosome-scale genome assembly of Docynia delavayi provides new insights into the α-farnesene biosynthesis
    Tian, Jinhong
    Chen, Zhuo
    Jiang, Can
    Li, Siguang
    Yun, Xinhua
    He, Chengzhong
    Wang, Dawei
    INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2024, 278
  • [49] The Chromosome-Scale Reference Genome of Macadamia tetraphylla Provides Insights Into Fatty Acid Biosynthesis
    Niu, Yingfeng
    Li, Guohua
    Ni, Shubang
    He, Xiyong
    Zheng, Cheng
    Liu, Ziyan
    Gong, Lidan
    Kong, Guanghong
    Li, Wei
    Liu, Jin
    FRONTIERS IN GENETICS, 2022, 13
  • [50] Multi-omics provides insights into genome evolution and betacyanin biosynthesis in halophyte of Suaeda salsa
    Wang, Xin
    Xia, Jiang-Bao
    Bai, Jun-Hong
    Yin, Shuo
    Wang, Wei
    Wang, Da-Wei
    Yi, Xin-Xin
    Dai, Sheng-Hong
    JOURNAL OF SYSTEMATICS AND EVOLUTION, 2024, 62 (06) : 1150 - 1164