Exploring the pre-immune landscape of antigen-specific T cells

[1] Benichou J(2012)Rep-Seq: uncovering the immunological repertoire through next-generation sequencing Immunology 135 183-191

[2] Ben-Hamo R(2017)VDJdb: a curated database of T-cell receptor sequences with known antigen specificity Nucleic Acids Res 46 D419-D427

[3] Louzoun Y(2016)Dynamics of individual T cell repertoires: from cord blood to centenarians J Immunol 196 5005-5013

[4] Efroni S(2015)Bioinformatic and statistical analysis of adaptive immune repertoires Trends Immunol 36 738-749

[5] Shugay M(2015)VDJtools: unifying post-analysis of T cell receptor repertoires PLoS Comput Biol 11 e1004503-665

[6] Bagaev DV(2017)Immunosequencing identifies signatures of cytomegalovirus exposure history and HLA-mediated effects on the T cell repertoire Nat Genet 49 659-784

[7] Zvyagin IV(2017)Discovery of T cell receptor beta motifs specific to HLA-B27-positive ankylosing spondylitis by deep repertoire sequence analysis Arthritis Rheumatol 69 774-5955

[8] Vroomans RM(2015)How a well-adapted immune system is organized Proc Natl Acad Sci U S A 112 5950-4140

[9] Crawford JC(2012)The role of naive T cell precursor frequency and recruitment in dictating immune response magnitude J Immunol 188 4135-664

[10] Dolton G(2002)Estimating the precursor frequency of naive antigen-specific CD8 T cells J Exp Med 195 657-3725

[1] Benichou J(2012)Rep-Seq: uncovering the immunological repertoire through next-generation sequencing Immunology 135 183-191

[2] Ben-Hamo R(2017)VDJdb: a curated database of T-cell receptor sequences with known antigen specificity Nucleic Acids Res 46 D419-D427

[3] Louzoun Y(2016)Dynamics of individual T cell repertoires: from cord blood to centenarians J Immunol 196 5005-5013

[4] Efroni S(2015)Bioinformatic and statistical analysis of adaptive immune repertoires Trends Immunol 36 738-749

[5] Shugay M(2015)VDJtools: unifying post-analysis of T cell receptor repertoires PLoS Comput Biol 11 e1004503-665

[6] Bagaev DV(2017)Immunosequencing identifies signatures of cytomegalovirus exposure history and HLA-mediated effects on the T cell repertoire Nat Genet 49 659-784

[7] Zvyagin IV(2017)Discovery of T cell receptor beta motifs specific to HLA-B27-positive ankylosing spondylitis by deep repertoire sequence analysis Arthritis Rheumatol 69 774-5955

[8] Vroomans RM(2015)How a well-adapted immune system is organized Proc Natl Acad Sci U S A 112 5950-4140

[9] Crawford JC(2012)The role of naive T cell precursor frequency and recruitment in dictating immune response magnitude J Immunol 188 4135-664

[10] Dolton G(2002)Estimating the precursor frequency of naive antigen-specific CD8 T cells J Exp Med 195 657-3725