Genome assembly and microsatellite marker development using Illumina and PacBio sequencing in Persicaria maackiana (Polygonaceae) from Korea

被引:0
作者
Kang-Rae Kim
So Young Park
Heesoo Kim
Jiyeon Kim
Jeong Min Hong
Sun-Yu Kim
Jeong-Nam Yu
机构
[1] Nakdonggang National Institute of Biological Resources,Animal and Plant Research Department
来源
Genes & Genomics | 2024年 / 46卷
关键词
Genomics; Genome assembly; Medicinal plants; Next-generation sequencing; Phylogeny; Polymorphism information content;
D O I
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中图分类号
学科分类号
摘要
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页码:187 / 202
页数:15
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[1]  
Adhikari S(2017)Application of molecular markers in plant genome analysis: a review Nucleus 60 283-297
[2]  
Saha S(2015)Development of genomic microsatellite markers in PLoS ONE 10 2114-2120
[3]  
Biswas A(2020) L. (Safflower) using next generation sequencing and assessment of their cross-species transferability and utility for diversity analysis Mar Genomics 54 4.11.1-4.11.39
[4]  
Rana TS(2014)De novo assembly and functional annotation of the heart + hemolymph transcriptome in the Caribbean spiny lobster Bioinformatics 30 6-7
[5]  
Bandyopadhyay TK(2014)Trimmomatic: a flexible trimmer for Illumina sequence data Curr Protoc Bioinform 48 1-729
[6]  
Ghosh P(2018)Genome annotation and curation using MAKER and MAKER-P J Diabetol 2 1637-1641
[7]  
Ambreen H(2014)Development of new antidiabetic drug from medicinal plant-genomic research Designpost (Korea) 534 169-196
[8]  
Kumar S(2022)Provisional checklist of vascular plants for the Korea peninsula flora (KPF) Mol Biol Rep 49 238-10
[9]  
Variath MT(2005)Development and characterization of novel microsatellite markers in Euphytica 142 1-8174
[10]  
Joshi G(2019) Rupr. using next-generation sequencing Genome Biol 20 8169-133