The complete mitochondrial genome of Triplophysa brevibarba with phylogenetic consideration

被引:0
作者
Yanhua Zhang
Zhe Wang
Zhimin Zhang
Mingsong Wu
Jianying Chen
Yanyu Zhao
机构
[1] Jiangsu Normal University,College of Life Sciences
[2] Zunyi Medical University,Department of Medical Genetics
[3] Qiannan Normal College for Nationalities,Department of Resource Environment
来源
Conservation Genetics Resources | 2018年 / 10卷
关键词
Nemacheilidae; Mitochondrial genome; Tibetan Plateau;
D O I
暂无
中图分类号
学科分类号
摘要
Triplophysa brevibarba is distributed in the upstream of Ya-lung River. The conservation status of this fish has been assessed as near threatened due to overfishing and habitat destruction. In the present study, we determined the first complete mitochondrial genome of T. brevibarba. This genome was 16,570 bp in size and contained 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and a typical control region. The overall nucleotide composition was: 28.2% A, 28.5% T, 25.3% C, and 18.0% G, with a total A + T content of 56.7%. The genome size, gene arrangement, and composition were similar to those of other Triplophysa species. Phylogenetic analysis of all 42 Nemacheilidae species showed that Triplophysa is a monophyletic group and T. brevibarba was clustered with Triplophysa minxiannesis and Triplophysa robusta located in the basal clade of Triplophysa.
引用
收藏
页码:79 / 83
页数:4
相关论文
共 50 条
  • [31] Characterization of the complete mitochondrial genome of Priacanthus tayenus (Perciformes: Priacanthidae) with phylogenetic consideration
    Chen, Huapu
    Deng, Siping
    Yang, Huirong
    Ma, Xilan
    Zhu, Chunhua
    Huang, Hai
    Li, Guangli
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2016, 1 (01): : 243 - 244
  • [32] The complete mitochondrial genome of Chlorotettix nigromaculatus (Hemiptera: Cicadellidae: Deltocephalinae) with phylogenetic consideration
    Yang, Wenjia
    Gao, Yarong
    Li, Can
    Song, Yuehua
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 624 - 625
  • [33] The complete mitochondrial genome of Triplophysa nanpanjiangensis Zhu and Cao 1988 (Cypriniformes: Nemacheilidae)
    Zhao, Jingzhuang
    Zou, Li
    Tian, Lu
    Liu, Mingqiu
    Jiang, Haibo
    Xie, Zhonggui
    Liang, Zhiqiang
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2023, 8 (12): : 1360 - 1363
  • [34] The complete mitochondrial genome sequence of Triplophysa xiangxiensis (Teleostei: Nemacheilidae)
    Wang, Xue
    Cao, Liang
    Zhang, E.
    [J]. MITOCHONDRIAL DNA PART A, 2017, 28 (1-2) : 171 - 172
  • [35] Complete mitochondrial genome of Devario kakhienensis (Cypriniformes: Danionidae: Danioninae): genome characterization and phylogenetic consideration
    Song, Lin
    Chen, Xiao Jiang
    Zhang, Sai
    Wang, Quan
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (09): : 1685 - 1687
  • [36] Complete mitochondrial genome of the apple snail Pomacea diffusa (Gastropoda, Ampullariidae) with phylogenetic consideration
    Guo, Jing
    Yang, Huirong
    Zhang, Chunxia
    Xue, Huayi
    Xia, Yu
    Zhang, Jia-En
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2017, 2 (02): : 865 - 867
  • [37] Complete mitochondrial genome of the miiuy croaker Miichthys miiuy (Perciformes, Sciaenidae) with phylogenetic consideration
    Cheng, Yuanzhi
    Xu, Tianjun
    Shi, Ge
    Wang, Rixin
    [J]. MARINE GENOMICS, 2010, 3 (3-4) : 201 - 209
  • [38] Complete mitochondrial genome of a kind of snakehead fish Channa siamensis and its phylogenetic consideration
    Rui Li
    Gang Wang
    Zheng-Yong Wen
    Yuan-Chao Zou
    Chuan-Jie Qin
    Yu Luo
    Jun Wang
    Gui-Hong Chen
    [J]. Genes & Genomics, 2019, 41 : 147 - 157
  • [39] Complete mitochondrial genome analysis of Japanese Spanish mackerel (Scomberomorus niphonius) with phylogenetic consideration
    Jin, Yan
    Ouyang, Longling
    Zheng, Hongxiang
    Lin, Yu
    Zhang, Menghan
    Li, Shengfa
    Cheng, Jiahua
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2017, 2 (01): : 56 - 57
  • [40] Complete mitochondrial genome of a kind of snakehead fish Channa siamensis and its phylogenetic consideration
    Li, Rui
    Wang, Gang
    Wen, Zheng-Yong
    Zou, Yuan-Chao
    Qin, Chuan-Jie
    Luo, Yu
    Wang, Jun
    Chen, Gui-Hong
    [J]. GENES & GENOMICS, 2019, 41 (02) : 147 - 157