The complete mitochondrial genome of Zhangmu cattle (Bos taurus)

被引:0
作者
Xian Guo
Pengjia Bao
Lin Xiong
Yanbin Zhu
Basang Wangdui
Xiaoyun Wu
Xuezhi Ding
Jie Pei
Ping Yan
机构
[1] Chinese Academy of Agricultural Sciences,Lanzhou Institute of Husbandry and Pharmaceutical Sciences
[2] Institute of Animal Husbandry and Veterinary Medicine,undefined
[3] Tibet Academy of Agriculture and Animal Husbandry Science,undefined
来源
Conservation Genetics Resources | 2018年 / 10卷
关键词
Zhangmu cattle; Mitochondrial genome; Himalayas;
D O I
暂无
中图分类号
学科分类号
摘要
The Zhangmu cattle (Bos taurus) is a rare breed native to the central Himalayas, which has recently suffered drastic reduction in its population. In the present study, the complete mitochondrial genome of Zhangmu cattle was determined. The 16,340 bp circular mitochondrial genome contained a common set of 37 mitochondrial genes, including 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes, and a control region. The gene order was identical to that of other B. taurus breeds. The overall base composition of this genome was as follows: 33.4% A, 26.0% C, 27.2% T and 13.4% G, with a total A+T content of 60.6%. Both phylogenetic trees based on the maximum likelihood and neighbor joining methods showed that Zhangmu cattle was grouped with other Asian breeds such as Korean cattle.
引用
收藏
页码:515 / 517
页数:2
相关论文
共 31 条
[1]  
Bernt M(2013)MITOS: improved de novo metazoan mitochondrial genome annotation Mol Phylogenet Evol 69 313-319
[2]  
Donath A(1999)Animal mitochondrial genomes Nucleic Acids Res 27 1767-1780
[3]  
Jühling F(2016)MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets Mol Biol Evol 33 1870-1874
[4]  
Externbrink F(1997)tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence Nucleic Acids Res 25 955-964
[5]  
Florentz C(2015)Mitogenomes from Egyptian cattle breeds: new clues on the origin of haplogroup Q and the early spread of PLoS ONE 10 e0141170-1256
[6]  
Fritzsch G(2008) from the Near East Mol Biol Evol 25 1253-undefined
[7]  
Pütz J(undefined)jModelTest: phylogenetic model averaging undefined undefined undefined-undefined
[8]  
Middendorf M(undefined)undefined undefined undefined undefined-undefined
[9]  
Stadler PF(undefined)undefined undefined undefined undefined-undefined
[10]  
Boore JL(undefined)undefined undefined undefined undefined-undefined