Three-dimensional structure of the enzyme dimanganese catalase from Thermus Thermophilus at 1 Å resolution

被引:0
|
作者
S. V. Antonyuk
V. R. Melik-Adamyan
A. N. Popov
V. S. Lamzin
P. D. Hempstead
P. M. Harrison
P. J. Artymyuk
V. V. Barynin
机构
[1] Russian Academy of Sciences,Shubnikov Institute of Crystallography
[2] EMBL Hamburg Outstation,European Molecular Biology Laboratory
[3] University of Sheffield,Krebs Institute for Biomolecular Research, Department of Molecular Biology and Biotechnology
来源
Crystallography Reports | 2000年 / 45卷
关键词
Enzyme; Chloride; Enzymatic Activity; Crystal Structure; Structural Data;
D O I
暂无
中图分类号
学科分类号
摘要
The crystal structures of two forms of the enzyme dimanganese catalase from Thermus Thermophilus (native and inhibited by chloride) were studied by X-ray diffraction analysis at 1.05 and 0.98 Å resolution, respectively. The atomic models of the molecules were refined to the R factors 9.8 and 10%, respectively. The three-dimensional molecular structures are characterized in detail. The analysis of electron-density distributions in the active centers of the native and inhibited enzyme forms revealed that the most flexible side chains of the amino acid residues Lys162 and Glu36 exist in two interrelated conformations. This allowed us to obtain the structural data necessary for understanding the mechanism of enzymatic activity of the dimanganese catalase.
引用
收藏
页码:105 / 116
页数:11
相关论文
共 50 条
  • [41] Crystal structure of phenylacetic acid degradation protein PaaG from Thermus thermophilus HB8
    Kichise, Tomoyasu
    Hisano, Tamao
    Takeda, Kazuki
    Miki, Kunio
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2009, 76 (04) : 779 - 786
  • [42] Crystal structure of N-acylamino acid racemase from Thermus thermophilus HB8
    Hayashida, Minoru
    Kim, Seong-Hoon
    Takeda, Kazuki
    Hisano, Tamao
    Miki, Kunio
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2008, 71 (01) : 519 - 523
  • [43] Three-dimensional Structure of a Kunitz-type Inhibitor in Complex with an Elastase-like Enzyme
    Garcia-Fernandez, Rossana
    Perbandt, Markus
    Rehders, Dirk
    Ziegelmueller, Patrick
    Piganeau, Nicolas
    Hahn, Ulrich
    Betzel, Christian
    de los Angeles Chavez, Maria
    Redecke, Lars
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2015, 290 (22) : 14154 - 14165
  • [44] Three-dimensional structure of a variant 'Termamyl-like' Geobacillus stearothermophilus α-amylase at 1.9 Å resolution
    Offen, Wendy A.
    Viksoe-Nielsen, Anders
    Borchert, Torben V.
    Wilson, Keith S.
    Davies, Gideon J.
    ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2015, 71 : 66 - 70
  • [45] Single-crystal time-of-flight neutron Laue methods: application to manganese catalase from Thermus thermophilus HB27
    Yamada, Taro
    Yano, Naomine
    Hosoya, Takaaki
    Kusaka, Katsuhiro
    JOURNAL OF APPLIED CRYSTALLOGRAPHY, 2019, 52 : 972 - 983
  • [46] Structure of D-alanine-D-alanine ligase from Thermus thermophilus HB8: cumulative conformational change and enzyme-ligand interactions
    Kitamura, Yoshiaki
    Ebihara, Akio
    Agari, Yoshihiro
    Shinkai, Akeo
    Hirotsu, Ken
    Kuramitsu, Seiki
    ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2009, 65 : 1098 - 1106
  • [47] Three-dimensional structure of xylonolactonase from Caulobacter crescentus: A mononuclear iron enzyme of the 6-bladed β-propeller hydrolase family
    Paakkonen, Johan
    Hakulinen, Nina
    Andberg, Martina
    Koivula, Anu
    Rouvinen, Juha
    PROTEIN SCIENCE, 2022, 31 (02) : 371 - 383
  • [48] Fluorescent Tags in Biology: Three-Dimensional Structure
    Pletneva, N. V.
    Goryacheva, E. A.
    Artemyev, I. V.
    Arkhipova, S. F.
    Pletnev, V. Z.
    RUSSIAN JOURNAL OF BIOORGANIC CHEMISTRY, 2020, 46 (04) : 498 - 505
  • [49] Laser microstructuration of three-dimensional enzyme reactors in microfluidic channels
    Iosin, Monica
    Scheul, Teodora
    Nizak, Clement
    Stephan, Olivier
    Astilean, Simion
    Baldeck, Patrice
    MICROFLUIDICS AND NANOFLUIDICS, 2011, 10 (03) : 685 - 690
  • [50] Laser microstructuration of three-dimensional enzyme reactors in microfluidic channels
    Monica Iosin
    Teodora Scheul
    Clément Nizak
    Olivier Stephan
    Simion Astilean
    Patrice Baldeck
    Microfluidics and Nanofluidics, 2011, 10 : 685 - 690