Three-dimensional structure of the enzyme dimanganese catalase from Thermus Thermophilus at 1 Å resolution

被引:0
|
作者
S. V. Antonyuk
V. R. Melik-Adamyan
A. N. Popov
V. S. Lamzin
P. D. Hempstead
P. M. Harrison
P. J. Artymyuk
V. V. Barynin
机构
[1] Russian Academy of Sciences,Shubnikov Institute of Crystallography
[2] EMBL Hamburg Outstation,European Molecular Biology Laboratory
[3] University of Sheffield,Krebs Institute for Biomolecular Research, Department of Molecular Biology and Biotechnology
来源
Crystallography Reports | 2000年 / 45卷
关键词
Enzyme; Chloride; Enzymatic Activity; Crystal Structure; Structural Data;
D O I
暂无
中图分类号
学科分类号
摘要
The crystal structures of two forms of the enzyme dimanganese catalase from Thermus Thermophilus (native and inhibited by chloride) were studied by X-ray diffraction analysis at 1.05 and 0.98 Å resolution, respectively. The atomic models of the molecules were refined to the R factors 9.8 and 10%, respectively. The three-dimensional molecular structures are characterized in detail. The analysis of electron-density distributions in the active centers of the native and inhibited enzyme forms revealed that the most flexible side chains of the amino acid residues Lys162 and Glu36 exist in two interrelated conformations. This allowed us to obtain the structural data necessary for understanding the mechanism of enzymatic activity of the dimanganese catalase.
引用
收藏
页码:105 / 116
页数:11
相关论文
共 50 条
  • [21] The three-dimensional structure of the cellobiohydrolase Cel7A from Aspergillus fumigatus at 1.5 Å resolution
    Moroz, Olga V.
    Maranta, Michelle
    Shaghasi, Tarana
    Harris, Paul V.
    Wilson, Keith S.
    Davies, Gideon J.
    ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2015, 71 : 114 - 120
  • [22] Three-dimensional structure of annexins
    Liemann, S
    Huber, R
    CELLULAR AND MOLECULAR LIFE SCIENCES, 1997, 53 (06) : 516 - 521
  • [23] Structure and oligomerization of the PilC type IV pilus biogenesis protein from Thermus thermophilus
    Karuppiah, Vijaykumar
    Hassan, Darin
    Saleem, Muhammad
    Derrick, Jeremy P.
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2010, 78 (09) : 2049 - 2057
  • [24] Crystal structure of a repair enzyme of oxidatively damaged DNA, MutM (Fpg), from an extreme thermophile, Thermus thermophilus HB8
    Sugahara, M
    Mikawa, T
    Kumasaka, T
    Yamamoto, M
    Kato, R
    Fukuyama, K
    Inoue, Y
    Kuramitsu, S
    EMBO JOURNAL, 2000, 19 (15) : 3857 - 3869
  • [25] The crystal structure of the ttCsaA protein:: an export-related chaperone from Thermus thermophilus
    Kawaguchi, S
    Müller, J
    Linde, D
    Kuramitsu, S
    Shibata, T
    Inoue, Y
    Vassylyev, DG
    Yokoyama, S
    EMBO JOURNAL, 2001, 20 (03) : 562 - 569
  • [26] Thermodynamic basis of the thermostability of CYP175A1 from Thermus thermophilus
    Behera, Rabindra Kumar
    Mazumdar, Shyamalava
    INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2010, 46 (04) : 412 - 418
  • [27] Crystal Structure of α-Galactosidase from Thermus thermophilus: Insight into Hexamer Assembly and Substrate Specificity
    Chen, Sheng-Chia
    Wu, Szu-Pei
    Chang, Yu-Yung
    Hwang, Tzann-Shun
    Lee, Tzong-Huei
    Hsu, Chun-Hua
    JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2020, 68 (22) : 6161 - 6169
  • [28] Three-dimensional structure of the catalytic domain of chitinase A1 from Bacillus circulans WL-12 at a very high resolution
    Matsumoto, T
    Nonaka, T
    Hashimoto, M
    Watanabe, T
    Mitsui, Y
    PROCEEDINGS OF THE JAPAN ACADEMY SERIES B-PHYSICAL AND BIOLOGICAL SCIENCES, 1999, 75 (09): : 269 - 274
  • [29] Origin of Asymmetry at the Intersubunit Interfaces of V1-ATPase from Thermus thermophilus
    Nagamatsu, Yumemi
    Takeda, Kazuki
    Kuranaga, Takeshi
    Numoto, Nobutaka
    Miki, Kunio
    JOURNAL OF MOLECULAR BIOLOGY, 2013, 425 (15) : 2699 - 2708
  • [30] Three-dimensional structure of yellow fluorescent protein zYFP538 from Zoanthus sp at the resolution 1.8 Å
    Pletneva, N. V.
    Pletnev, S. V.
    Chudakov, D. M.
    Tikhonova, T. V.
    Popov, V. O.
    Martynov, V. I.
    Wlodawer, A.
    Dauter, Z.
    Pletnev, V. Z.
    RUSSIAN JOURNAL OF BIOORGANIC CHEMISTRY, 2007, 33 (04) : 390 - 398