Hymenobacter terrigena sp. nov., isolated from soil

被引:0
|
作者
Jeong-Eun Ohn
Leonid N. Ten
Kyeung Il Park
Byung-Oh Kim
Jeung-Sul Han
Hee-Young Jung
机构
[1] Kyungpook National University,School of Food Science and Biotechnology
[2] Kyungpook National University,School of Applied Biosciences
[3] Yeungnam University,Department of Horticulture and Life Science
[4] Kyungpook National University,Department of Horticultural Science
[5] Kyungpook National University,Institute of Plant Medicine
来源
Journal of Microbiology | 2018年 / 56卷
关键词
polyphasic taxonomy;
D O I
暂无
中图分类号
学科分类号
摘要
A Gram-stain-negative, non-motile, non-spore-forming, rodshaped, aerobic bacterial strain, designated S1-2-2-5T, was isolated from the Jeollabuk-do province, Republic of Korea, and was characterized taxonomically using a polyphasic approach. Comparative 16S rRNA gene sequence analysis showed that strain S1-2-2-5T belonged to the family Cytophagaceae in phylum Bacteroidetes, and was most closely related to Hymenobacter terrae DG7AT (98.2%), Hymenobacter rubidus DG7BT (98.0%), Hymenobacter soli PB17T (97.7%), Hymenobacter daeguensis 16F3Y-2T (97.2%) and Hymenobacter saemangeumensis GSR0100T (97.0%). The G + C content of the genomic DNA of strain S1-2-2-5T was 59.4 mol%. The detection of menaquinone MK-7 as the predominant respiratory quinone, a fatty acid profile with summed feature 3 (C16:1ω7c/C16:1ω6c; 32.0%), C15:0 iso (19.0%), and C15:0 anteiso (15.0%) as the major components, and a polar lipid profile with phosphatidylethanolamine as the major component supported the affiliation of strain S1-2-2-5T to the genus Hymenobacter. The DNA-DNA relatedness between strain S1-2-2-5T and H. terrae KCTC 32554T, H. rubidus KCTC 32553T, H. soli KCTC 12607T, H. daeguensis KCTC 52537T, and H. saemangeumensis KACC 16452T were 49.5, 48.2, 34.1, 28.1, and 31.8% respectively, clearly showing that the isolate is not related to them at the species level. Strain S1-2-2-5T could be clearly differentiated from its closest neighbors on the basis of its phenotypic, genotypic and chemotaxonomic features. Therefore, strain S1-2-2-5T represents a novel species of the genus Hymenobacter, for which the name Hymenobacter terrigena sp. nov. is proposed. The type strain is S1-2-2-5T (= KCTC 52737T = JCM 32195T).
引用
收藏
页码:231 / 237
页数:6
相关论文
共 50 条
  • [31] Hymenobacter pomorum sp. nov., Isolated from Apple Orchard Soil
    Ten, Leonid N.
    Li, Weilan
    Lee, Seung-Yeol
    Kang, In-Kyu
    Cho, Young-Je
    Kim, Myung Kyum
    Jung, Hee-Young
    CURRENT MICROBIOLOGY, 2019, 76 (01) : 117 - 123
  • [32] Hymenobacter agri sp. nov., a novel bacterium isolated from soil
    Jigon Han
    Leonid N. Ten
    Dong Hoon Lee
    In-Kyu Kang
    Hee-Young Jung
    Antonie van Leeuwenhoek, 2018, 111 : 1815 - 1823
  • [33] Hymenobacter citatus sp. nov., isolated from soil in South Korea
    Yuna Park
    Yoonjee Chang
    Myung Kyum Kim
    Archives of Microbiology, 2021, 203 : 3111 - 3116
  • [34] Terrabacter terrigena sp nov., isolated from soil
    Yoon, Jung-Hoon
    Park, Sooyeon
    Kang, So-Jung
    Jung, Yong-Taek
    Kim, Wonyong
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2009, 59 : 2798 - 2802
  • [35] Hymenobacter jeollabukensis sp nov., isolated from soil
    Ten, Leonid N.
    Han, Young Eun
    Park, Kyeung Il
    Kang, In-Kyu
    Han, Jeung-Sul
    Jung, Hee-Young
    JOURNAL OF MICROBIOLOGY, 2018, 56 (07) : 500 - 506
  • [36] Algoriphagus terrigena sp nov., isolated from soil
    Yoon, JH
    Lee, MH
    Kang, SJ
    Oh, TK
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2006, 56 : 777 - 780
  • [37] Paenibacillus terrigena sp nov., isolated from soil
    Xie, Cheng-Hui
    Yokota, Akira
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 : 70 - 72
  • [38] Nocardioides terrigena sp nov., isolated from soil
    Yoon, Jung-Hoon
    Kang, So-Jung
    Lee, Soo-Young
    Oh, Tae-Kwang
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 : 2472 - 2475
  • [39] Flavobacterium terrigena sp nov., isolated from soil
    Yoon, Jung-Hoon
    Kang, So-Jung
    Lee, Jung-Sook
    Oh, Tae-Kwang
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 : 947 - 950
  • [40] Hymenobacter segetis sp nov., isolated from soil
    Ten, Leonid N.
    Lim, Soo Jeong
    Kim, Byung-Oh
    Kang, In-Kyu
    Jung, Hee-Young
    ARCHIVES OF MICROBIOLOGY, 2018, 200 (08) : 1167 - 1175