DAMEfinder: a method to detect differential allele-specific methylation

被引:0
作者
Stephany Orjuela
Dania Machlab
Mirco Menigatti
Giancarlo Marra
Mark D. Robinson
机构
[1] University of Zurich,Institute of Molecular Life Sciences and SIB Swiss Institute of Bioinformatics
[2] University of Zurich,Institute of Molecular Cancer Research
[3] Friedrich Miescher Institute for Biomedical Research,undefined
来源
Epigenetics & Chromatin | / 13卷
关键词
DNA methylation; Differential methylation; Allele-specific methylation (ASM); Imprinting;
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  • [1] Cedar H(2009)Linking DNA methylation and histone modification: patterns and paradigms Nat Rev Genet 10 295-304
  • [2] Bergman Y(2010)Molecular signals of epigenetic states Science 330 612-616
  • [3] Bonasio R(1978)Use of restriction enzymes to study eukaryotic DNA methylation: II. the symmetry of methylated sites supports semi-conservative copying of the methylation pattern J Mol Biol 118 49-60
  • [4] Tu S(2008)DNA methylation landscapes: provocative insights from epigenomics Nat Rev Genet 9 465-476
  • [5] Reinberg D(2013)DNA methylation dynamics in health and disease Nat Struct Mol Biol 20 274-281
  • [6] Bird AP(2006)DNA methylation: bisulphite modification and analysis Nat Protocols 1 2353-2364
  • [7] Suzuki MM(2019)Bisulfite-free direct detection of 5-methylcytosine and 5-hydroxymethylcytosine at base resolution Nat Biotechnol 37 424-429
  • [8] Bird A(2013)Non-canonical functions of the DNA methylome in gene regulation Biochem J 451 13-23
  • [9] Bergman Y(2011)Genomic imprinting: the emergence of an epigenetic paradigm Nat Rev Genet 12 565-575
  • [10] Cedar H(2019)The Erice Imprinting Group: Genomic imprinting and physiological processes in mammals Cell 176 952-965