Inference of gene regulatory subnetworks from time course gene expression data

被引:0
作者
Xi-Jun Liang
Zhonghang Xia
Li-Wei Zhang
Fang-Xiang Wu
机构
[1] Dalian University of Technology,School of Mathematical Sciences
[2] Western Kentucky University,Dept. of Mathematics and Computer Science
[3] University of Saskatchewan,Department of Mechanical Engineering
来源
BMC Bioinformatics | / 13卷
关键词
Gene Expression Data; Gene Regulatory Network; Splitting Algorithm; Nuclear Norm; Gene Regulatory Network Inference;
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学科分类号
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[1]  
Hu X(2009)Mining, modeling, and evaluation of subnetworks from large biomolecular networks and its comparison study IEEE Trans Inf Technol Biomed 13 184-194
[2]  
Ng M(2009)A survey of statistical models for reverse engineering gene regulatory networks IEEE Signal Process Mag 26 76-97
[3]  
Wu F(2007)Inference of gene regulatory networks and its validation Current Bioinformatics 2 139-144
[4]  
Sokhansanj B(2011)Directed partial correlation: inferring large-scale gene regulatory network through induced topology disruptions PLoS One 6 e16835-452
[5]  
Huang Y(2004)Fast algorithm for detecting community structure in networks Phys Rev E Stat Nonlin Soft Matter Phys 69 066133-307
[6]  
Tienda-Luna I(1990)Partitioning sparse matrices with eigenvectors of graphs SIAM J Matrix Anal Applic 11 430-7826
[7]  
Wang Y(1970)An efficient heuristic procedure for partitioning graphs Bell System Technical Journal 49 291-2663
[8]  
Wu F(2002)Community structure in social and biological networks Proc Natl Acad Sci USA 99 7821-818
[9]  
Yuan Y(2004)Defining and identifying communities in networks Proc Natl Acad Sci USA 101 2658-330
[10]  
Li C(2005)Uncovering the overlapping community structure of complex networks in nature and society Nature 435 814-1095