The Gibberellic Acid-Stimulated Transcript Gene Family in Moso Bamboo: A Genome-Wide Survey and Expression Profiling During Development and Abiotic Stresses

被引:0
|
作者
Dan Hou
Qingsong Bai
Juan Li
Lihua Xie
Xiangyu Li
Zhanchao Cheng
Jian Gao
机构
[1] State Forestry Administration,International Center for Bamboo and Rattan, Key Laboratory of Bamboo and Rattan Science and Technology
来源
关键词
Moso bamboo; gene family; Genome-wide analysis; Tissue development; Hormone crosstalk; Abiotic stress treatment;
D O I
暂无
中图分类号
学科分类号
摘要
Gibberellic acid-stimulated transcript (GAST) proteins are widely distributed among plant species and are involved in various aspects of plant growth, plant responses to stress, and hormone crosstalk. However, in moso bamboo (Phyllostachys edulis), bioinformatics data and functional information on the GAST family are limited. Here, a total of eight GAST genes were first identified in the whole genome of moso bamboo and then clustered into three groups based on phylogenetic analysis. Each clade is well supported by the conserved intron/exon structures and motifs, suggesting that the members within the same subfamily perform similar functions. A number of development-, hormone-, and stress-related elements are randomly distributed in the promoter sequences of PheGASTs. Tissue expression analysis indicates that most PheGASTs might be associated with moso bamboo flower development and rapid shoot growth. Furthermore, the PheGASTs display phytohormone- and stress-inducible expression patterns in response to various circumstances (abscisic acid, gibberellins, cold, drought, and salinity). Among these, PheGASR1 was assumed to have a distinct regulatory role in rapid shoot growth and abiotic stress responses involving the ABA pathway. Collectively, our results provide extensive insights into the GAST gene family, thereby contributing to the screening of additional candidate genes in moso bamboo.
引用
收藏
页码:1135 / 1147
页数:12
相关论文
共 50 条
  • [1] The Gibberellic Acid-Stimulated Transcript Gene Family in Moso Bamboo: A Genome-Wide Survey and Expression Profiling During Development and Abiotic Stresses
    Hou, Dan
    Bai, Qingsong
    Li, Juan
    Xie, Lihua
    Li, Xiangyu
    Cheng, Zhanchao
    Gao, Jian
    JOURNAL OF PLANT GROWTH REGULATION, 2018, 37 (04) : 1135 - 1147
  • [2] Genome-Wide Analysis of the MAPKKK Gene Family Under Abiotic Stresses in Moso Bamboo (Phyllostachys edulis)
    Huang, Feiyi
    Wang, Jiaxin
    FORESTS, 2024, 15 (11):
  • [3] The heat shock factor gene family in Salix suchowensis: a genome-wide survey and expression profiling during development and abiotic stresses
    Zhang, Jin
    Li, Yu
    Jia, Hui-Xia
    Li, Jian-Bo
    Huang, Juan
    Lu, Meng-Zhu
    Hu, Jian-Jun
    FRONTIERS IN PLANT SCIENCE, 2015, 6
  • [4] Genome-Wide Identification and Characterization of Gibberellic Acid-Stimulated Arabidopsis Gene Family in Pineapple (Ananas comosus)
    Yang, Mingzhe
    Liu, Chaoyang
    Zhang, Wei
    Wu, Jing
    Zhong, Ziqin
    Yi, Wen
    Liu, Hui
    Leng, Yan
    Sun, Weisheng
    Luan, Aiping
    He, Yehua
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2023, 24 (23)
  • [5] Genome-wide identification and expression profiling of trihelix gene family under abiotic stresses in wheat
    Xiao, Jie
    Hu, Rui
    Gu, Ting
    Han, Jiapeng
    Qiu, Ding
    Su, Peipei
    Feng, Jialu
    Chang, Junli
    Yang, Guangxiao
    He, Guangyuan
    BMC GENOMICS, 2019, 20 (1)
  • [6] Genome-wide identification and expression profiling of trihelix gene family under abiotic stresses in wheat
    Jie Xiao
    Rui Hu
    Ting Gu
    Jiapeng Han
    Ding Qiu
    Peipei Su
    Jialu Feng
    Junli Chang
    Guangxiao Yang
    Guangyuan He
    BMC Genomics, 20
  • [7] Genome-wide investigation of the AP2/ERF gene family in ginger: evolution and expression profiling during development and abiotic stresses
    Xing, Haitao
    Jiang, Yusong
    Zou, Yong
    Long, Xiaoling
    Wu, Xiaoli
    Ren, Yun
    Li, Yuan
    Li, Hong-Lei
    BMC PLANT BIOLOGY, 2021, 21 (01)
  • [8] Genome-wide investigation of the AP2/ERF gene family in ginger: evolution and expression profiling during development and abiotic stresses
    Haitao Xing
    Yusong Jiang
    Yong Zou
    Xiaoling Long
    Xiaoli Wu
    Yun Ren
    Yuan Li
    Hong-Lei Li
    BMC Plant Biology, 21
  • [9] Genome-Wide Analysis and Expression Profiling of the Heat Shock Factor Gene Family in Phyllostachys edulis during Development and in Response to Abiotic Stresses
    Xie, Lihua
    Li, Xiangyu
    Hou, Dan
    Cheng, Zhanchao
    Liu, Jun
    Li, Juan
    Mu, Shaohua
    Gao, Jian
    FORESTS, 2019, 10 (02)
  • [10] Genome-Wide Identification of JRL Genes in Moso Bamboo and Their Expression Profiles in Response to Multiple Hormones and Abiotic Stresses
    Zhang, Zhijun
    Huang, Bin
    Chen, Jialu
    Jiao, Yang
    Guo, Hui
    Liu, Shenkui
    Ramakrishnan, Muthusamy
    Qi, Guoning
    FRONTIERS IN PLANT SCIENCE, 2022, 12