Identification of differentially expressed miRNAs associated with chronic kidney disease–mineral bone disorder

被引：0
作者：
Kyung Im Kim
Sohyun Jeong
Nayoung Han
Jung Mi Oh
Kook-Hwan Oh
In-Wha Kim
机构：
[1] Korea University,College of Pharmacy
[2] Seoul National University,College of Pharmacy and Research Institute of Pharmaceutical Sciences
[3] Seoul National University Hospital,Division of Nephrology, Department of Internal Medicine
来源：
Frontiers of Medicine | 2017年 / 11卷
关键词：
chronic kidney disease; microRNA; mineral bone disorder; uremia;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
The purpose of this study is to characterize a meta-signature of differentially expressed mRNA in chronic kidney disease (CKD) to predict putative microRNA (miRNA) in CKD–mineral bone disorder (CKD–MBD) and confirm the changes in these genes and miRNA expression under uremic conditions by using a cell culture system. PubMed searches using MeSH terms and keywords related to CKD, uremia, and mRNA arrays were conducted. Through a computational analysis, a meta-signature that characterizes the significant intersection of differentially expressed mRNA and expected miRNAs associated with CKD–MBD was determined. Additionally, changes in gene and miRNA expressions under uremic conditions were confirmed with human Saos-2 osteoblast-like cells. A statistically significant mRNA meta-signature of upregulated and downregulated mRNA levels was identified. Furthermore, miRNA expression profiles were inferred, and computational analyses were performed with the imputed microRNA regulation based on weighted ranked expression and putative microRNA targets (IMRE) method to identify miRNAs associated with CKD occurrence. TLR4 and miR-146b levels were significantly associated with CKD–MBD. TLR4 levels were significantly downregulated, whereas primiR- 146b and miR-146b were upregulated in the presence of uremic toxins in human Saos-2 osteoblast-like cells. Differentially expressed miRNAs associated with CKD-MBD were identified through a computational analysis, and changes in gene and miRNA expressions were confirmed with an in vitro cell culture system.
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页码：378 / 385
页数：7
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