Genome-wide Long Non-coding RNA Analysis Identified Circulating LncRNAs as Novel Non-invasive Diagnostic Biomarkers for Gynecological Disease

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作者
Wen-Tao Wang
Yu-Meng Sun
Wei Huang
Bo He
Ya-Nan Zhao
Yue-Qin Chen
机构
[1] Key Laboratory of Gene Engineering of the Ministry of Education,
[2] State Key Laboratory for Biocontrol,undefined
[3] School of Life Science,undefined
[4] Sun Yat-sen University,undefined
[5] Dept of Obst & Gyn,undefined
[6] Sun Yat-sen Memorial Hospital,undefined
[7] Sun Yat-sen University,undefined
来源
Scientific Reports | / 6卷
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摘要
Increasing evidence indicates that long non-coding RNAs (lncRNAs) play important roles in human diseases. This study aimed to investigate the tissue and serum lncRNAs that are differentially expressed between patients with endometriosis, a gynecological disease, to evaluate the potential of these lncRNAs as non-invasive markers for the disease. The differentially expressed lncRNAs as competing endogenous RNAs (ceRNAs) were also analyzed to predict their functions in disease development. Genome-wide profiling of lncRNA expression patterns revealed that many lncRNAs were abnormally expressed between sera and tissuesof the patient samples. A set of aberrant differentially expressed lncRNAs were further validated in a validation cohort of 110 serum and 24 tissue samples. Functional analysis predicted that differentially expressed lncRNAs may participate in disease development through crosstalk between the ceRNAs of miRNAs and may be involved in a range of cellular pathways including steroid or hormone responses. We also found a unique set of lncRNAs that were associated with disease severity and progression and their diagnostic values were also investigated. Our study demonstrated that lncRNAs could potentially serve as non-invasive biomarkers for the diagnosis of endometriosis and as important regulators in the progression of this disease.
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[1]  
Guttman M(2009)Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals Nature 458 223-227
[2]  
Ponting CP(2009)Evolution and functions of long noncoding RNAs Cell 136 629-641
[3]  
Oliver PL(2011)Molecular mechanisms of long noncoding RNAs Mol Cell 43 904-914
[4]  
Reik W(2009)The genetic signatures of noncoding RNAs Plos Genet 5 e1000459-1135
[5]  
Wang KC(2012)Perspectives of Long Non-Coding RNAs in Cancer Diagnostics Front Genet 3 32-2959
[6]  
Chang HY(2015)Circulating CUDR, LSINCT-5 and PTENP1 long noncoding RNAs in sera distinguish patients with gastric cancer from healthy controls Int J Cancer 137 1128-259
[7]  
Mattick JS(2013)Long non-coding RNA metastasis associated in lung adenocarcinoma transcript 1 derived miniRNA as a novel plasma-based biomarker for diagnosing prostate cancer Eur J Cancer 49 2949-962
[8]  
Reis EM(2015)Identification of the long non-coding RNA H19 in plasma as a novel biomarker for diagnosis of gastric cancer Sci Rep 5 11516-75
[9]  
Verjovski-Almeida S(2014)Investigation of circulating lncRNAs in B-cell neoplasms Clin Chim Acta 431C 255-602
[10]  
Dong L(2014)Maternal plasma RNA sequencing for genome-wide transcriptomic profiling and identification of pregnancy-associated transcripts Clin Chem 60 954-606