Subtyping of sarcomas based on pathway enrichment scores in bulk and single cell transcriptomes

被引：0
|
作者：
Shengwei Li
Qian Liu
Haiying Zhou
Hui Lu
Xiaosheng Wang
机构：
[1] China Pharmaceutical University,Biomedical Informatics Research Lab, School of Basic Medicine and Clinical Pharmacy
[2] China Pharmaceutical University,Cancer Genomics Research Center, School of Basic Medicine and Clinical Pharmacy
[3] China Pharmaceutical University,Big Data Research Institute
[4] Zhejiang University,Department of Orthopedics, The First Affiliated Hospital, College of Medicine
[5] Alibaba-Zhejiang University Joint Research Center of Future Digital Healthcare,undefined
来源：
Journal of Translational Medicine | / 20卷
关键词：
Sarcoma; Subtyping; Clustering analysis; Tumor microenvironment; Immune signatures; Genomic instability;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
引用
收藏
相关论文
共 50 条
  • [41] Three distinct destines of malignant plasma cells based on single-cell transcriptomes and evolutionary trajectories
    Xu, Jiadai
    Wang, Yawen
    Li, Panpan
    Li, Jing
    Liu, Peng
    CLINICAL LYMPHOMA MYELOMA & LEUKEMIA, 2022, 22 : S100 - S100
  • [42] Identification of Treg-related prognostic molecular subtypes and individualized characteristics in clear cell renal cell carcinoma through single-cell transcriptomes and bulk RNA sequencing
    Weng, Kang qiang
    Li, Jin Yu
    Li, Hu
    She, Lin Lu
    Qiu, Jun Liang
    Qi, Hao
    Qi, Hui Yue
    Li, Yong Sheng
    Dai, Ying bo
    INTERNATIONAL IMMUNOPHARMACOLOGY, 2024, 130
  • [43] The emerging double-edged sword role of Sirtuins in the gastric inflammation-carcinoma sequence revealed by bulk and single-cell transcriptomes
    Wang, Mengyang
    Bi, Chenxiao
    Li, Hong
    Lu, Lizhen
    Gao, Tao
    Huang, Panpan
    Liu, Chengxia
    Wang, Bin
    FRONTIERS IN ONCOLOGY, 2022, 12
  • [44] Identification of a novel immunogenic death-associated model for predicting the immune microenvironment in lung adenocarcinoma from single-cell and Bulk transcriptomes
    Pan, Xinyu
    Chen, Huili
    Zhang, Linxiang
    Xie, Yiluo
    Zhang, Kai
    Lian, Chaoqun
    Wang, Xiaojing
    JOURNAL OF CANCER, 2024, 15 (16): : 5165 - 5182
  • [45] An individualized stemness-related signature to predict prognosis and immunotherapy responses for gastric cancer using single-cell and bulk tissue transcriptomes
    Zheng, Linyong
    Chen, Jingyan
    Ye, Wenhai
    Fan, Qi
    Chen, Haifeng
    Yan, Haidan
    CANCER MEDICINE, 2024, 13 (01):
  • [46] mitch: multi-contrast pathway enrichment for multi-omics and single-cell profiling data
    Kaspi, Antony
    Ziemann, Mark
    BMC GENOMICS, 2020, 21 (01)
  • [47] mitch: multi-contrast pathway enrichment for multi-omics and single-cell profiling data
    Antony Kaspi
    Mark Ziemann
    BMC Genomics, 21
  • [48] Integration of Single-Cell and Bulk Transcriptomes to Identify a Poor Prognostic Tumor Subgroup to Predict the Prognosis of Patients with Early-stage Lung Adenocarcinoma
    Shi, Zijian
    Jia, Linchuang
    Wang, Baichuan
    Wang, Shuo
    He, Long
    Li, Yingxi
    Wang, Guixin
    Song, Wenbin
    He, Xianneng
    Liu, Zhaoyi
    Shi, Cangchang
    Tian, Yao
    Zhu, Keyun
    JOURNAL OF CANCER, 2025, 16 (04): : 1397 - 1412
  • [49] Single Cell Mutation Detection with Multiplex PCR-based Targeted Enrichment Sequencing
    Wu, Z.
    Satya, R.
    Samara, R.
    Wang, Y.
    Lader, E.
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2014, 16 (06): : 786 - 786
  • [50] Peripheral immune cell death in sepsis based on bulk RNA and single-cell RNA sequencing
    Liu, Shanshou
    Duan, Chujun
    Xie, Jiangang
    Zhang, Jinxin
    Luo, Xu
    Wang, Qianmei
    Liang, Xiaoli
    Zhao, Xiaojun
    Zhuang, Ran
    Zhao, Wei
    Yin, Wen
    HELIYON, 2023, 9 (07)
12345