A structural interpretation of the effect of GC-content on efficiency of RNA interference

被引：0
|
作者：
Chi Yu Chan
C Steven Carmack
Dang D Long
Anil Maliyekkel
Yu Shao
Igor B Roninson
Ye Ding
机构：
[1] Wadsworth Center,New York State Department of Health
[2] Ordway Research Institute,Cancer Center
[3] University of Illinois at Chicago,Department of Molecular Genetics
来源：
BMC Bioinformatics | / 10卷
关键词：
Partial Correlation Analysis; RNAi Activity; RNAi Machinery; RNAi Efficiency; Target Accessibility;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
引用
收藏
相关论文
共 50 条
  • [1] A structural interpretation of the effect of GC-content on efficiency of RNA interference
    Chan, Chi Yu
    Carmack, C. Steven
    Long, Dang D.
    Maliyekkel, Anil
    Shao, Yu
    Roninson, Igor B.
    Ding, Ye
    BMC BIOINFORMATICS, 2009, 10
  • [2] GC-Content Normalization for RNA-Seq Data
    Risso, Davide
    Schwartz, Katja
    Sherlock, Gavin
    Dudoit, Sandrine
    BMC BIOINFORMATICS, 2011, 12
  • [3] GC-Content Normalization for RNA-Seq Data
    Davide Risso
    Katja Schwartz
    Gavin Sherlock
    Sandrine Dudoit
    BMC Bioinformatics, 12
  • [4] GC-Content Dependence of Elastic and Overstretching Properties of DNA:RNA Hybrid Duplexes
    Yang, Dongni
    Liu, Wenzhao
    Deng, Xiangyu
    Xie, Wei
    Chen, Hu
    Zhong, Zhensheng
    Ma, Jie
    BIOPHYSICAL JOURNAL, 2020, 119 (04) : 852 - 861
  • [5] Bounds for DNA codes with constant GC-content
    King, OD
    ELECTRONIC JOURNAL OF COMBINATORICS, 2003, 10 (01):
  • [6] Recombination drives the evolution of GC-content in the human genome
    Meunier, J
    Duret, L
    MOLECULAR BIOLOGY AND EVOLUTION, 2004, 21 (06) : 984 - 990
  • [7] Analytical Biases Associated with GC-Content in Molecular Evolution
    Romiguier, Jonathan
    Roux, Camille
    FRONTIERS IN GENETICS, 2017, 8
  • [8] A Novel Visualization of DNA Sequences, Reflecting GC-Content
    Zhang, Zhujin
    Li, Jiuyong
    Pan, Linqiang
    Ye, Yunming
    Zeng, Xiangxiang
    Song, Tao
    Zhang, Xiaofeng
    Wang, Eric Ke
    MATCH-COMMUNICATIONS IN MATHEMATICAL AND IN COMPUTER CHEMISTRY, 2014, 72 (02) : 533 - 550
  • [9] Evidence of Selection upon Genomic GC-Content in Bacteria
    Hildebrand, Falk
    Meyer, Axel
    Eyre-Walker, Adam
    PLOS GENETICS, 2010, 6 (09)
  • [10] Recombination, GC-content and the human pseudoautosomal boundary paradox
    Galtier, N
    TRENDS IN GENETICS, 2004, 20 (08) : 347 - 349
12345