Characterization of the complete chloroplast genome sequence of Gynostemma compressum (Cucurbitaceae), an endemic plant in China

被引：0
作者：
Xiao Zhang
Huimin Li
Tao Zhou
Yanci Yang
Guifang Zhao
机构：
[1] Northwest University,Key Laboratory of Resource Biology and Biotechnology in Western China (Ministry of Education), College of Life Science
来源：
Conservation Genetics Resources | 2018年 / 10卷
关键词：
Complete chloroplast genome; Illumina sequencing; Phylogeny;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
Gynostemma compressum is an endemic herbaceous species distributed in northwestern China. Here, we report the complete chloroplast (cp) genome sequence of G. compressum using Illumina pair-end sequencing. The circular complete cp genome of G. compressum was 157,959 bp in length and contained a large single copy region (86,809 bp), a small single copy region (18,560 bp) and two short inverted repeat (IRa and IRb) regions (26,295 bp). The cp genome encodes 133 genes including 87 protein-coding genes, 37 transfer RNA (tRNA) genes, 8 ribosomal RNA (rRNA) genes and 1 pseudogene. The maximum likelihood phylogenetic analysis showed that all the species of G. compressum formed a monophyletic clade and Gynostemma pentaphyllum was closely related to the genus Citrullus with strong bootstrap values.
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页码：141 / 144
页数：3
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