Genomic re-assessment of the transposable element landscape of the potato genome

[1] Ahmed I(2011)Genome-wide evidence for local DNA methylation spreading from small RNA-targeted sequences in Arabidopsis Nucleic Acids Res 39 6919-6931

[2] Sarazin A(2018)Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data Genome Biol 19 111-D1201

[3] Bowler C(2016)MaizeGDB update: new tools, data and interface for the maize model organism database Nucleic Acids Res 44 D1195-1415

[4] Colot V(2018)Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361 eaar7191-916

[5] Quesneville H(2016)The future of transposable element annotation and their classification in the light of functional genomics—what we can learn from the fables of Jean de la Fontaine? Mob Genet Elem 6 e1256852-1255

[6] Alaux M(2017)The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution Nature 546 148-1190

[7] Rogers J(2009)Exceptional diversity, non-random distribution, and rapid evolution of retroelements in the B73 maize genome PLoS Genet 5 e1000732-580

[8] Letellier T(2018)A transposable element annotation pipeline and expression analysis reveal potentially active elements in the microalga BMC Genom 19 378-199

[9] Flores R(2018)Ten things you should know about transposable elements Genome Biol 19 199-29

[10] Alfama F(1994)Mobile inverted-repeat elements of the tourist family are associated with the genes of many cereal grasses Proc Natl Acad Sci 91 1411-1797

[1] Ahmed I(2011)Genome-wide evidence for local DNA methylation spreading from small RNA-targeted sequences in Arabidopsis Nucleic Acids Res 39 6919-6931

[2] Sarazin A(2018)Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data Genome Biol 19 111-D1201

[3] Bowler C(2016)MaizeGDB update: new tools, data and interface for the maize model organism database Nucleic Acids Res 44 D1195-1415

[4] Colot V(2018)Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361 eaar7191-916

[5] Quesneville H(2016)The future of transposable element annotation and their classification in the light of functional genomics—what we can learn from the fables of Jean de la Fontaine? Mob Genet Elem 6 e1256852-1255

[6] Alaux M(2017)The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution Nature 546 148-1190

[7] Rogers J(2009)Exceptional diversity, non-random distribution, and rapid evolution of retroelements in the B73 maize genome PLoS Genet 5 e1000732-580

[8] Letellier T(2018)A transposable element annotation pipeline and expression analysis reveal potentially active elements in the microalga BMC Genom 19 378-199

[9] Flores R(2018)Ten things you should know about transposable elements Genome Biol 19 199-29

[10] Alfama F(1994)Mobile inverted-repeat elements of the tourist family are associated with the genes of many cereal grasses Proc Natl Acad Sci 91 1411-1797