Evaluation of the antitumor effect of neoantigen peptide vaccines derived from the translatome of lung cancer

被引:0
作者
Lian, Fenbao [1 ,2 ]
Yang, Haitao [1 ,2 ]
Hong, Rujun [1 ,2 ]
Xu, Hang [1 ,2 ]
Yu, Tingting [3 ]
Sun, Gang [4 ,5 ]
Zheng, Guanying [1 ,2 ]
Xie, Baosong [1 ,2 ]
机构
[1] Fujian Med Univ, Shengli Clin Med Coll, 134 East St, Fuzhou 350001, Fujian, Peoples R China
[2] Fujian Prov Hosp, Dept Resp Med & Crit Care Med, 134 East St, Fuzhou 350001, Peoples R China
[3] Xinjiang Med Univ, Affiliated Tumor Hosp, Dept Thorac Oncol, Urumqi 830011, Xinjiang, Peoples R China
[4] Xinjiang Med Univ, Affiliated Tumor Hosp, Dept Breast & Thyroid Surg, 789 East Suzhou St, Urumqi 830011, Xinjiang, Peoples R China
[5] Xinjiang Canc Ctr, Key Lab Oncol Xinjiang Uyghur Autonomous Reg, Urumqi 830011, Xinjiang, Peoples R China
关键词
Neoantigen; Translatome; Immunotherapy; Lung cancer; Peptides; CELL; SENSITIVITY;
D O I
10.1007/s00262-024-03670-0
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Emerging evidence suggests that tumor-specific neoantigens are ideal targets for cancer immunotherapy. However, how to predict tumor neoantigens based on translatome data remains obscure. Through the extraction of ribosome-nascent chain complexes (RNCs) from LLC cells, followed by RNC-mRNA extraction, RNC-mRNA sequencing, and comprehensive bioinformatic analysis, we successfully identified proteins undergoing translatome and exhibiting mutations in the cells. Subsequently, novel antigens identification was analyzed by the interaction between their high affinity and the Major Histocompatibility Complex (MHC). Neoantigens immunogenicity was analyzed by enzyme-linked immunospot assay (ELISpot). Finally, in vivo experiments in mice were conducted to evaluate the antitumor effects of translatome-derived neoantigen peptides on lung cancer. The results showed that ten neoantigen peptides were identified and synthesized by translatome data from LLC cells; 8 out of the 10 neoantigens had strong immunogenicity. The neoantigen peptide vaccine group exhibited significant tumor growth inhibition effect. In conclusion, neoantigen peptide vaccine derived from the translatome of lung cancer exhibited significant tumor growth inhibition effect.
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页数:11
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共 34 条
  • [1] Comprehensive analysis of the genome transcriptome and proteome landscapes of three tumor cell lines
    Akan, Pelin
    Alexeyenko, Andrey
    Costea, Paul Igor
    Hedberg, Lilia
    Solnestam, Beata Werne
    Lundin, Sverker
    Hallman, Jimmie
    Lundberg, Emma
    Uhlen, Mathias
    Lundeberg, Joakim
    [J]. GENOME MEDICINE, 2012, 4
  • [2] Beilharz Traude H., 2004, Briefings in Functional Genomics & Proteomics, V3, P103, DOI 10.1093/bfgp/3.2.103
  • [3] ESTABLISHMENT OF A CLONED LINE OF LEWIS LUNG-CARCINOMA CELLS ADAPTED TO CELL-CULTURE
    BERTRAM, JS
    JANIK, P
    [J]. CANCER LETTERS, 1980, 11 (01) : 63 - 73
  • [4] MuPeXI: prediction of neo-epitopes from tumor sequencing data
    Bjerregaard, Anne-Mette
    Nielsen, Morten
    Hadrup, Sine Reker
    Szallasi, Zoltan
    Eklund, Aron Charles
    [J]. CANCER IMMUNOLOGY IMMUNOTHERAPY, 2017, 66 (09) : 1123 - 1130
  • [5] Neoantigen-based cancer immunotherapy
    Bobisse, Sara
    Foukas, Periklis G.
    Coukos, George
    Harari, Alexandre
    [J]. ANNALS OF TRANSLATIONAL MEDICINE, 2016, 4 (14)
  • [6] Primary and Acquired Resistance to Immunotherapy in Lung Cancer: Unveiling the Mechanisms Underlying of Immune Checkpoint Blockade Therapy
    Boyero, Laura
    Sanchez-Gastaldo, Amparo
    Alonso, Miriam
    Francisco Noguera-Ucles, Jose
    Molina-Pinelo, Sonia
    Bernabe-Caro, Reyes
    [J]. CANCERS, 2020, 12 (12) : 1 - 36
  • [7] A dendritic cell vaccine increases the breadth and diversity of melanoma neoantigen-specific T cells
    Carreno, Beatriz M.
    Magrini, Vincent
    Becker-Hapak, Michelle
    Kaabinejadian, Saghar
    Hundal, Jasreet
    Petti, Allegra A.
    Ly, Amy
    Lie, Wen-Rong
    Hildebrand, William H.
    Mardis, Elaine R.
    Linette, Gerald P.
    [J]. SCIENCE, 2015, 348 (6236) : 803 - 808
  • [8] Elements of cancer immunity and the cancer-immune set point
    Chen, Daniel S.
    Mellman, Ira
    [J]. NATURE, 2017, 541 (7637) : 321 - 330
  • [9] STAR: ultrafast universal RNA-seq aligner
    Dobin, Alexander
    Davis, Carrie A.
    Schlesinger, Felix
    Drenkow, Jorg
    Zaleski, Chris
    Jha, Sonali
    Batut, Philippe
    Chaisson, Mark
    Gingeras, Thomas R.
    [J]. BIOINFORMATICS, 2013, 29 (01) : 15 - 21
  • [10] Comparing protein abundance and mRNA expression levels on a genomic scale
    Greenbaum, D
    Colangelo, C
    Williams, K
    Gerstein, M
    [J]. GENOME BIOLOGY, 2003, 4 (09)