Actirhodobacter atriluteus gen. nov., sp. nov., isolated from the surface water of the Yellow Sea

被引:0
作者
Hua-Peng Xue
Dao-Feng Zhang
Lin Xu
Xiang-Ning Wang
Ai-Hua Zhang
Jian-Ke Huang
Chuang Liu
机构
[1] Hohai University,Institute of Marine Biotechnology and Bio
[2] Zhejiang Sci-Tech University,Resource Utilization, College of Oceanography
[3] Nanjing Forestry University,College of Life Sciences and Medicine
来源
Antonie van Leeuwenhoek | 2021年 / 114卷
关键词
Yellow sea;
D O I
暂无
中图分类号
学科分类号
摘要
A Gram-stain-negative, aerobic, orange-pigmented bacterial strain, designated HHU K3-1 T, was isolated from the surface water of the Yellow Sea. The strain was observed to grow on 2216E agar medium, and growth occurred at pH 6.0–8.0 (optimum 7.0), 28–37 °C (optimum 28 °C), and in the presence of 0.5–5% (w/v) NaCl (optimum 1–3%). The major fatty acids (> 10%) were summed feature 3 (C16:1ω6c/C16:1ω7c), C17:1ω6c and summed feature 8 (C18:1ω6c/C18:1ω7c). Strain HHU K3-1 T was found to contain ubiquinone-10 as the predominant quinone and the major polar lipids were diphosphatidylglycerol (DPG), phosphatidylethanolamine (PE), phosphatidylglycerol (PG) and sphingoglycolipid (SGL). The 16S rRNA gene sequence analysis indicated that strain HHU K3-1 T shared highest similarities with Pelagerythrobacter marensis KCTC 22370 T (97.7%) and Qipengyuania oceanensis MCCC 1A09965T (96.9%). However, a phylogenetic tree based on 288 orthologous clusters (OCs) indicated that HHU K3-1 T was close related to Parapontixanthobacter aurantiacus MCCC 1A09962T. The pairwise AAI and evolutionary distance between HHU K3-1 T and Parapontixanthobacter aurantiacus MCCC 1A09962T are 67.1% and 0.43, respectively, which meet the recently proposed standard to differentiate genera in the family Erythrobacteraceae. On the basis of the result obtained by the polyphasic taxonomic study, strain HHU K3-1 T can be considered to represent a novel genus in the family Erythrobacteraceae, for which the name Actirhodobacter atriluteus gen. nov., sp. nov. is proposed. The type strain is HHU K3-1 T (= MCCC 1K04225T = KCTC 72834 T = CGMCC 1.17395 T).
引用
收藏
页码:1059 / 1068
页数:9
相关论文
共 154 条
  • [1] Altschul SF(1997)Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Res 25 3389-3402
  • [2] Madden TL(1981)A note on the separation of natural mixtures of bacterial ubiquinones using reverse-phase partition thin-layer chromatography and high performance liquid chromatography J Appl Bacteriol 51 129-134
  • [3] Schäffer AA(2004)MUSCLE: a multiple sequence alignment method with reduced time and space complexity BMC Bioinform 5 1-19
  • [4] Collins MD(1981)Evolutionary trees from DNA sequences: a maximum likelihood approach J Mol Evol 17 368-376
  • [5] Jones D(1985)Confidence limits on phylogenies: an approach using the bootstrap Evolution 39 783-791
  • [6] Edgar RC(2015) gen. nov., sp. nov., a member of the family Int J Syst Evol Microbiol 65 3658-3665
  • [7] Felsenstein J(1971) isolated from subterrestrial sediment Syst Biol 20 406-416
  • [8] Felsenstein J(2007)Toward defining the course of evolution: minimum change for a specific tree topology Int J Syst Evol Microbiol 57 81-91
  • [9] Feng X-M(1996)DNA-DNA hybridization values and their relationship to whole-genome sequence similarities J Gen Appl Microbiol 42 457-469
  • [10] Mo Y-X(2015)Comparative lipoquinone analysis of influent sewage and activated sludge by high-performance liquid chromatography and photodiode array detection Int J Syst Evol Microbiol 65 1531-1536