Exploiting genotyping by sequencing to characterize the genomic structure of the American cranberry through high-density linkage mapping

被引:0
作者
Giovanny Covarrubias-Pazaran
Luis Diaz-Garcia
Brandon Schlautman
Joseph Deutsch
Walter Salazar
Miguel Hernandez-Ochoa
Edward Grygleski
Shawn Steffan
Massimo Iorizzo
James Polashock
Nicholi Vorsa
Juan Zalapa
机构
[1] University of Wisconsin,Department of Horticulture
[2] Instituto Nacional de Investigaciones Agrícolas,Department of Statistics
[3] Forestales y Pecuarias,USDA
[4] Campo Experimental Pabellón,ARS, Vegetable Crops Research Unit
[5] University of Wisconsin,Department of Horticultural Sciences, Plants for Human Health Institute
[6] Valley Corporation,Blueberry and Cranberry Research and Extension Center
[7] University of Wisconsin,undefined
[8] North Carolina State University,undefined
[9] USDA-ARS,undefined
[10] Genetic Improvement of Fruits and Vegetables Laboratory,undefined
[11] Rutgers University,undefined
来源
BMC Genomics | / 17卷
关键词
Genotyping by sequencing; Imputation; Pseudo-testcross; Linkage disequilibrium; Segregation distortion; Synteny;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 623 条
  • [41] Allan AC(2011)Genotype and SNP calling from next-generation sequencing data Nat Rev Genet 12 443-25
  • [42] Michael TP(2009)Computational approaches and software tools for genetic linkage map estimation in plants Brief Bioinform 10 595-511
  • [43] Setubal JC(2011)Multipoint maximum likelihood mapping in a full-sib family of an outbreeding species Gen Res 93 343-34
  • [44] Celton J-M(2014)Construction of a genetic linkage map of an interspecific diploid blueberry population and identification of QTL for chilling requirement and cold hardiness Mol Breed 34 2033-77
  • [45] Rees DJG(1994)RAPD-based genetic linkage map of blueberry derived from a cross between diploid species (Vaccinium darrowi and V.elliottii) J Amer Soc Hort Sci 122 69-98
  • [46] Williams KP(1971)Comparative chromosome morphology of diploid Vaccinium species J Amer Soc Hort 96 289-82
  • [47] Holt SH(2004)Transmission of a cyclical translocation in two cranberry cultivars Hereditas 140 81-9
  • [48] Ruiz Rojas JJ(1998)Tetrad analysis with translocation heterozygotes in cranberry (Vaccinium macrocarpon Ait.): Interstitial chiasma and directed segregation of centromeres Hereditas 84 75-31
  • [49] Chatterjee M(2012)Construction and analysis of a high-density genetic linkage map in cabbage (Brassica oleracea L. var. capitata) BMC Genomics 13 523-91
  • [50] Huang X(2007)High-density Brassica oleracea linkage map: identification of useful new linkages Theor Appl Genet 115 277-507