Biology as a Constructive Physics

被引：7
作者：
Kozyrev S.V. [1 ]
机构：
[1] Steklov Mathematical Institute of Russian Academy of Sciences, Gubkina str. 8, Moscow
来源：
p-Adic Numbers, Ultrametric Analysis and Applications | 2018年 / 10卷 / 4期
基金：
俄罗斯科学基金会;
关键词：
complexity as energy; Kolmogorov complexity; third evolutionary synthesis;
D O I：
10.1134/S2070046618040076
中图分类号：
学科分类号：
摘要：
Yuri Manin’s approach to Zipf’s law (Kolmogorov complexity as energy) is applied to investigation of biological evolution. Model of constructive statistical mechanics where complexity is a contribution to energy is proposed to model genomics. Scaling laws in genomics are discussed in relation to Zipf’s law. This gives a model of Eugene Koonin’s Third Evolutionary Synthesis – physical model which should describe scaling in genomics. © 2018, Pleiades Publishing, Ltd.
引用
收藏
页码：305 / 311
页数：6
相关论文
共 25 条
[1]  
Manin Y.I., Complexity vs energy: theory of computation and theoretical physics, J. Phys.: Conf. Series, 532, (2014)
[2]  
Manin Y.I., Error-correcting codes and neural networks, Sel. Math. New Ser., 24, pp. 521-530, (2018)
[3]  
Manin Y., Neural codes and homotopy types: mathematical models of place field recognition, Moscow Math. J., 15, pp. 741-748, (2015)
[4]  
Manin Y., Marcolli M., Semantic spaces, Math. Comput. Sci., 10, 4, pp. 459-477, (2016)
[5]  
Koonin E.V., The Logic of Chance: The Nature and Origin of Biological Evolution, (2012)
[6]  
Koonin E.V., Are there laws of genome evolution?, PLoS Comput. Biol., 7, 8, (2011)
[7]  
Barbieri M., What is code biology?, BioSystems, 164, pp. 1-10, (2018)
[8]  
Koonin E.V., Wolf Y.I., Karev G.P., Power Laws, Scale-Free Networks and Genome Biology, (2006)
[9]  
Avetisov V., Gorsky A., Nechaev S., Valba O., Finite plateau in spectral gap of polychromatic constrained random networks, Phys. Rev. E, 96, (2017)
[10]  
Ansari A., Berendzen J., Bowne S.F., Frauenfelder H., Iben I.E., Sauke T.B., Shyamsunder E., Young R.D., Protein states and proteinquakes, PNAS, 82, 15, pp. 5000-5004, (1985)
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