Indexing a protein-protein interaction network expedites network alignment

被引：0
|
作者：
Md Mahmudul Hasan
Tamer Kahveci
机构：
[1] University of Florida,Department of Computer & Information Science and Engineering
来源：
BMC Bioinformatics | / 16卷
关键词：
Network alignment; Protein-protein interaction network; Indexing;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
引用
收藏
相关论文
共 50 条
  • [31] Protein-Protein Interaction (PPI) Network: Recent Advances in Drug Discovery
    Athanasios, Alexiou
    Charalampos, Vairaktarakis
    Vasileios, Tsiamis
    Ashraf, Ghulam Md.
    CURRENT DRUG METABOLISM, 2017, 18 (01) : 5 - 10
  • [32] Identifying responsive functional modules from protein-protein interaction network
    Wu, Zikai
    Zhao, Xingming
    Chen, Luonan
    MOLECULES AND CELLS, 2009, 27 (03) : 271 - 277
  • [33] Global Alignment of Protein-Protein Interaction Networks: A Survey
    Elmsallati, Ahed
    Clark, Connor
    Kalita, Jugal
    IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2016, 13 (04) : 689 - 705
  • [34] Joint Alignment of Multiple Protein-Protein Interaction Networks via Convex Optimization
    Hashemifar, Somaye
    Huang, Qixing
    Xu, Jinbo
    JOURNAL OF COMPUTATIONAL BIOLOGY, 2016, 23 (11) : 903 - 911
  • [35] Transcriptional regulatory network and protein-protein interaction to reveal the mechanism of pancreatic cancer
    Sun, Hongli
    Han, Bing
    Cheng, Xinhua
    Ma, Kai
    MOLECULAR BIOLOGY REPORTS, 2014, 41 (01) : 387 - 395
  • [36] Identification of retinoblastoma related genes with shortest path in a protein-protein interaction network
    Li, Bi-Qing
    Zhang, Jian
    Huang, Tao
    Zhang, Lei
    Cai, Yu-Dong
    BIOCHIMIE, 2012, 94 (09) : 1910 - 1917
  • [37] A Novel Method for Functional Prediction of Proteins from a Protein-Protein Interaction Network
    Kang, Tae-Ho
    Yeo, Myung-Ho
    Yoo, Jae-Soo
    Kim, Hak-Yong
    Chung, Jean S.
    JOURNAL OF THE KOREAN PHYSICAL SOCIETY, 2009, 54 (04) : 1716 - 1720
  • [38] Function Annotation of Proteins in Eriocheir sinensis Based on the Protein-Protein Interaction Network
    Hao, Tong
    Yu, Ailing
    Wang, Bin
    Liu, Anan
    Sun, Jinsheng
    PROCEEDINGS OF THE THIRD INTERNATIONAL CONFERENCE ON COMMUNICATIONS, SIGNAL PROCESSING, AND SYSTEMS, 2015, 322 : 831 - 837
  • [39] Identifying Interactions Between Kinases and Substrates Based on Protein-Protein Interaction Network
    Chen, Qingfeng
    Deng, Canshang
    Lan, Wei
    Liu, Zhixian
    Zheng, Ruiqing
    Liu, Jin
    Wang, Jianxin
    JOURNAL OF COMPUTATIONAL BIOLOGY, 2019, 26 (08) : 836 - 845
  • [40] A protein-protein interaction network aligner study in the multi-objective domain
    Menor-Flores, Manuel
    Vega-Rodriguez, Miguel A.
    COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE, 2024, 250
12345