Prediction of long noncoding RNA functions with co-expression network in esophageal squamous cell carcinoma

[1] Dunham I(2012)An integrated encyclopedia of DNA elements in the human genome Nature 489 57-74

[2] Kundaje A(2012)The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression Genome Res 22 1775-89

[3] Aldred SF(2012)Modular regulatory principles of large non-coding RNAs Nature 482 339-46

[4] Collins PJ(1991)A gene from the region of the human X inactivation centre is expressed exclusively from the inactive X chromosome Nature 349 38-44

[5] Davis CA(2007)Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs Cell 129 1311-23

[6] Doyle F(2012)NONCODE v3.0: integrative annotation of long noncoding RNAs Nucleic Acids Res 40 D210-5

[7] Derrien T(2011)Large-scale prediction of long non-coding RNA functions in a coding-non-coding gene co-expression network Nucleic Acids Res 39 3864-78

[8] Johnson R(2013)Long non-coding RNAs function annotation: a global prediction method based on bi-colored networks Nucleic Acids Res 41 e35-86

[9] Bussotti G(2015)Cancer incidence and mortality worldwide: Sources, methods and major patterns in GLOBOCAN 2012 Int J Cancer 136 E359-86

[10] Tanzer A(2013)Exome and whole-genome sequencing of esophageal adenocarcinoma identifies recurrent driver events and mutational complexity Nat Genet 45 478-5

[1] Dunham I(2012)An integrated encyclopedia of DNA elements in the human genome Nature 489 57-74

[2] Kundaje A(2012)The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression Genome Res 22 1775-89

[3] Aldred SF(2012)Modular regulatory principles of large non-coding RNAs Nature 482 339-46

[4] Collins PJ(1991)A gene from the region of the human X inactivation centre is expressed exclusively from the inactive X chromosome Nature 349 38-44

[5] Davis CA(2007)Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs Cell 129 1311-23

[6] Doyle F(2012)NONCODE v3.0: integrative annotation of long noncoding RNAs Nucleic Acids Res 40 D210-5

[7] Derrien T(2011)Large-scale prediction of long non-coding RNA functions in a coding-non-coding gene co-expression network Nucleic Acids Res 39 3864-78

[8] Johnson R(2013)Long non-coding RNAs function annotation: a global prediction method based on bi-colored networks Nucleic Acids Res 41 e35-86

[9] Bussotti G(2015)Cancer incidence and mortality worldwide: Sources, methods and major patterns in GLOBOCAN 2012 Int J Cancer 136 E359-86

[10] Tanzer A(2013)Exome and whole-genome sequencing of esophageal adenocarcinoma identifies recurrent driver events and mutational complexity Nat Genet 45 478-5